ClinVar Miner

Variants in gene TJP2 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
226 23 0 23 10 0 0 33

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 10 0
likely benign 10 0 23
benign 0 23 0

All variants with conflicting interpretations #

Total variants: 33
Download table as spreadsheet
HGVS dbSNP
NM_001170414.2(TJP2):c.116C>T (p.Thr39Met) rs138241615
NM_004817.3(TJP2):c.2004G>A (p.Met668Ile) rs34774441
NM_004817.3(TJP2):c.2727G>A (p.Ala909=) rs2095876
NM_004817.3(TJP2):c.2992-8C>T rs143965233
NM_004817.3(TJP2):c.3029C>T (p.Ser1010Phe) rs41277907
NM_004817.3(TJP2):c.3063C>T (p.Ala1021=) rs367977493
NM_004817.4(TJP2):c.1091C>T (p.Thr364Met) rs77321498
NM_004817.4(TJP2):c.1137A>G (p.Leu379=) rs17062695
NM_004817.4(TJP2):c.1350C>T (p.Ser450=) rs17062723
NM_004817.4(TJP2):c.1478G>A (p.Arg493Lys) rs41277901
NM_004817.4(TJP2):c.1877C>G (p.Thr626Ser) rs149911553
NM_004817.4(TJP2):c.1917C>T (p.Asp639=) rs12340440
NM_004817.4(TJP2):c.2040G>A (p.Gly680=) rs111723895
NM_004817.4(TJP2):c.2131T>C (p.Ser711Pro) rs35797487
NM_004817.4(TJP2):c.2137A>G (p.Ser713Gly) rs116545275
NM_004817.4(TJP2):c.2367A>G (p.Ala789=) rs75668442
NM_004817.4(TJP2):c.2646G>A (p.Ala882=) rs11788754
NM_004817.4(TJP2):c.2691C>T (p.Pro897=) rs149969431
NM_004817.4(TJP2):c.2715C>T (p.Thr905=) rs2282336
NM_004817.4(TJP2):c.2778C>T (p.Asp926=) rs140442228
NM_004817.4(TJP2):c.2810T>C (p.Leu937Pro) rs28556975
NM_004817.4(TJP2):c.2819C>T (p.Pro940Leu) rs199852211
NM_004817.4(TJP2):c.2880+19C>T rs200384355
NM_004817.4(TJP2):c.297G>A (p.Ser99=) rs72709079
NM_004817.4(TJP2):c.3372G>A (p.Thr1124=) rs745427593
NM_004817.4(TJP2):c.3407+7G>A rs369322645
NM_004817.4(TJP2):c.342+12G>T rs7027812
NM_004817.4(TJP2):c.3495G>A (p.Glu1165=) rs111595785
NM_004817.4(TJP2):c.382C>A (p.Gln128Lys) rs41305539
NM_004817.4(TJP2):c.61-6A>T rs200415824
NM_004817.4(TJP2):c.698G>A (p.Arg233Gln) rs150883816
NM_004817.4(TJP2):c.887G>A (p.Ser296Asn) rs376434139
NM_004817.4(TJP2):c.918C>T (p.Ile306=) rs374523970

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