ClinVar Miner

Variants in gene TJP2 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
234 34 0 12 18 0 0 29

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 17 2
likely benign 17 0 12
benign 2 12 0

All variants with conflicting interpretations #

Total variants: 29
Download table as spreadsheet
NM_004817.4(TJP2):c.1091C>T (p.Thr364Met) rs77321498
NM_004817.4(TJP2):c.1473C>A (p.Ala491=) rs138509345
NM_004817.4(TJP2):c.185C>T (p.Thr62Met) rs138241615
NM_004817.4(TJP2):c.1877C>G (p.Thr626Ser) rs149911553
NM_004817.4(TJP2):c.2034C>T (p.Asn678=) rs373160031
NM_004817.4(TJP2):c.2040G>A (p.Gly680=) rs111723895
NM_004817.4(TJP2):c.2384C>T (p.Pro795Leu) rs139867659
NM_004817.4(TJP2):c.258C>T (p.Val86=) rs530810462
NM_004817.4(TJP2):c.2636A>G (p.Gln879Arg) rs75450131
NM_004817.4(TJP2):c.2646G>A (p.Ala882=) rs11788754
NM_004817.4(TJP2):c.2691C>T (p.Pro897=) rs149969431
NM_004817.4(TJP2):c.2751C>T (p.Arg917=) rs184519036
NM_004817.4(TJP2):c.2778C>T (p.Asp926=) rs140442228
NM_004817.4(TJP2):c.2832G>A (p.Pro944=) rs191634088
NM_004817.4(TJP2):c.2880+19C>T rs200384355
NM_004817.4(TJP2):c.297G>A (p.Ser99=) rs72709079
NM_004817.4(TJP2):c.2992-8C>T rs143965233
NM_004817.4(TJP2):c.3063C>T (p.Ala1021=) rs367977493
NM_004817.4(TJP2):c.3342T>C (p.His1114=) rs61753629
NM_004817.4(TJP2):c.334G>A (p.Ala112Thr) rs144396411
NM_004817.4(TJP2):c.3372G>A (p.Thr1124=) rs745427593
NM_004817.4(TJP2):c.3495G>A (p.Glu1165=) rs111595785
NM_004817.4(TJP2):c.395C>G (p.Pro132Arg) rs141496493
NM_004817.4(TJP2):c.61-6A>T rs200415824
NM_004817.4(TJP2):c.698G>A (p.Arg233Gln) rs150883816
NM_004817.4(TJP2):c.705G>T (p.Arg235=) rs750625862
NM_004817.4(TJP2):c.908C>T (p.Pro303Leu) rs199641113
NM_004817.4(TJP2):c.911G>A (p.Gly304Glu) rs200222645
NM_004817.4(TJP2):c.918C>T (p.Ile306=) rs374523970

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