ClinVar Miner

Variants in gene TRMU with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
138 9 0 13 13 1 0 26

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign risk factor
pathogenic 0 1 0 0 0 0
likely pathogenic 1 0 0 0 0 0
uncertain significance 0 0 0 9 5 0
likely benign 0 0 9 0 12 0
benign 0 0 5 12 0 1
risk factor 0 0 0 0 1 0

All variants with conflicting interpretations #

Total variants: 26
Download table as spreadsheet
HGVS dbSNP
NM_018006.4(TRMU):c.-117G>C rs116519615
NM_018006.4(TRMU):c.-178G>A rs114587018
NM_018006.5(TRMU):c.*8G>C rs55905826
NM_018006.5(TRMU):c.-15T>C rs764076380
NM_018006.5(TRMU):c.-19G>C rs886057609
NM_018006.5(TRMU):c.-44G>A rs370964036
NM_018006.5(TRMU):c.1018+9C>T rs373346869
NM_018006.5(TRMU):c.10T>G (p.Leu4Val) rs114302881
NM_018006.5(TRMU):c.1158G>A (p.Leu386=) rs79874854
NM_018006.5(TRMU):c.1164G>A (p.Pro388=) rs202047181
NM_018006.5(TRMU):c.1192C>T (p.Arg398Cys) rs34152016
NM_018006.5(TRMU):c.1218C>T (p.Ser406=) rs754239335
NM_018006.5(TRMU):c.272A>G (p.Lys91Arg) rs138044544
NM_018006.5(TRMU):c.28G>T (p.Ala10Ser) rs11090865
NM_018006.5(TRMU):c.387A>G (p.Ala129=) rs144586525
NM_018006.5(TRMU):c.429C>T (p.His143=) rs746421213
NM_018006.5(TRMU):c.442G>A (p.Glu148Lys) rs34012206
NM_018006.5(TRMU):c.479C>T (p.Ala160Val) rs35338668
NM_018006.5(TRMU):c.552C>T (p.Ala184=) rs35772382
NM_018006.5(TRMU):c.75G>T (p.Arg25Ser) rs2272938
NM_018006.5(TRMU):c.772+8G>A rs201372242
NM_018006.5(TRMU):c.835G>A (p.Val279Met) rs387907022
NM_018006.5(TRMU):c.864C>T (p.Asp288=) rs61737827
NM_018006.5(TRMU):c.900G>T (p.Leu300=) rs113846383
NM_018006.5(TRMU):c.927C>T (p.Arg309=) rs9627420
NM_018006.5(TRMU):c.9C>G (p.Ala3=) rs75417986

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