ClinVar Miner

Variants in gene TUBB3 with conflicting interpretations

See also:
Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
219 33 0 22 10 0 5 32

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 6 2 0 0
likely pathogenic 6 0 4 0 0
uncertain significance 2 4 0 9 4
likely benign 0 0 9 0 16
benign 0 0 4 16 0

All variants with conflicting interpretations #

Total variants: 32
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_006086.4(TUBB3):c.58-49C>T rs28593634 0.19243
NM_006086.4(TUBB3):c.58-22C>T rs2302897 0.19080
NM_006086.4(TUBB3):c.1215G>A (p.Glu405=) rs141064323 0.00809
NM_006086.4(TUBB3):c.702C>T (p.Ser234=) rs147245174 0.00803
NM_006086.4(TUBB3):c.921C>T (p.His307=) rs147283850 0.00083
NM_006086.4(TUBB3):c.166+12C>T rs374561094 0.00048
NM_006086.4(TUBB3):c.1287G>A (p.Thr429=) rs142238093 0.00046
NM_006086.4(TUBB3):c.357G>A (p.Val119=) rs34174718 0.00040
NM_006086.4(TUBB3):c.507C>T (p.Val169=) rs373718068 0.00033
NM_006086.4(TUBB3):c.167-6C>T rs144873806 0.00031
NM_006086.4(TUBB3):c.666C>T (p.Tyr222=) rs61743676 0.00021
NM_006086.4(TUBB3):c.278-7T>G rs199842533 0.00011
NM_006086.4(TUBB3):c.447G>A (p.Thr149=) rs371662941 0.00006
NM_006086.4(TUBB3):c.330G>A (p.Ala110=) rs535819460 0.00003
NM_006086.4(TUBB3):c.813C>T (p.Ala271=) rs776465410 0.00002
NM_006086.4(TUBB3):c.1206C>T (p.Gly402=) rs757192357 0.00001
NM_006086.4(TUBB3):c.1331C>T (p.Ser444Leu) rs587784504 0.00001
NM_006086.4(TUBB3):c.1336G>A (p.Ala446Thr) rs369454228 0.00001
NM_006086.4(TUBB3):c.210C>T (p.Pro70=) rs754683361 0.00001
NM_006086.4(TUBB3):c.606C>T (p.Ile202=) rs576180572 0.00001
NM_006086.4(TUBB3):c.1070C>T (p.Pro357Leu) rs2151093027
NM_006086.4(TUBB3):c.136C>T (p.Arg46Trp) rs1555625363
NM_006086.4(TUBB3):c.167-21C>G rs72813449
NM_006086.4(TUBB3):c.167-5C>G rs147928399
NM_006086.4(TUBB3):c.292G>A (p.Gly98Ser) rs587784505
NM_006086.4(TUBB3):c.689C>T (p.Ser230Leu) rs886041459
NM_006086.4(TUBB3):c.728C>T (p.Pro243Leu) rs587784506
NM_006086.4(TUBB3):c.763G>A (p.Val255Ile) rs1057517908
NM_006086.4(TUBB3):c.785G>A (p.Arg262His) rs864321716
NM_006086.4(TUBB3):c.805G>A (p.Gly269Ser) rs2151092918
NM_006086.4(TUBB3):c.862G>A (p.Glu288Lys) rs1057521924
NM_006086.4(TUBB3):c.982G>A (p.Glu328Lys) rs1057518686

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