Variants studied for Squamous cell carcinoma of the head and neck

Minimum submission review status:		Collection method:
Minimum conflict level: Report conflict between different conditions
Gene type: Distinguish antisense genes from sense genes
Show significances as they were submitted (without aggregation into standard terms)
		ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic	likely pathogenic	uncertain significance	likely benign	benign	drug response	total
19	336	9	14	6	6	384

Gene and significance breakdown #

Total genes and gene combinations: 33

Download table as spreadsheet

Gene or gene combination	pathogenic	likely pathogenic	uncertain significance	likely benign	benign	drug response	total
TP53	14	184	6	13	6	0	217
PIK3CA	0	42	0	0	0	0	42
FBXW7	0	15	0	0	0	0	15
EGFR	0	6	0	0	0	6	12
CDKN2A	0	10	0	0	0	0	10
HRAS, LRRC56	0	9	0	0	0	0	9
NFE2L2	0	8	0	0	0	0	8
BRAF	0	7	0	0	0	0	7
B2M	0	5	0	0	0	0	5
PTEN	1	4	0	0	0	0	5
RHOA	0	5	0	0	0	0	5
CREBBP	0	4	0	0	0	0	4
CTNNB1, LOC126806658	0	4	0	0	0	0	4
SMAD4	0	4	0	0	0	0	4
GNAS	0	3	0	0	0	0	3
IDH2	0	3	0	0	0	0	3
ING1	3	0	0	0	0	0	3
PPP2R1A	0	3	0	0	0	0	3
RAC1	0	3	0	0	0	0	3
EP300	0	2	0	0	0	0	2
ERBB2	0	2	0	0	0	0	2
FGFR3	0	2	0	0	0	0	2
H3C11	0	2	0	0	0	0	2
LOC126862483, TP53, WRAP53	0	0	1	1	0	0	2
MAP2K1	0	2	0	0	0	0	2
MAP2K2	0	2	0	0	0	0	2
U2AF1	0	2	0	0	0	0	2
AKT1	0	1	0	0	0	0	1
DPYD	0	1	0	0	0	0	1
KEAP1	0	0	1	0	0	0	1
MAPK1	0	1	0	0	0	0	1
POLR1C, SLC29A1	0	0	1	0	0	0	1
TNFRSF10B	1	0	0	0	0	0	1

Submitter and significance breakdown #

Total submitters: 6

Download table as spreadsheet

Submitter	pathogenic	likely pathogenic	uncertain significance	likely benign	benign	drug response	total
Database of Curated Mutations (DoCM)	0	330	0	0	0	0	330
Mendelics	2	8	7	13	6	0	36
Institute of Biochemistry, Molecular Biology and Biotechnology, University of Colombo	12	1	0	1	0	0	14
Genetics, Bhagwan Mahavir Medical Research Centre	0	0	0	0	0	6	6
OMIM	5	0	0	0	0	0	5
Genome Sciences Centre, British Columbia Cancer Agency	0	1	2	0	0	0	3

The information on this website is not intended for direct diagnostic use or medical decision-making without review by a genetics professional. Individuals should not change their health behavior solely on the basis of information contained on this website. Neither the University of Utah nor the National Institutes of Health independently verfies the submitted information. If you have questions about the information contained on this website, please see a health care professional.