ClinVar Miner

Variants in gene combination LHCGR, STON1-GTF2A1L

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If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign total
40 23 126 60 68 264

Condition and significance breakdown #

Total conditions: 18
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Condition pathogenic likely pathogenic uncertain significance likely benign benign total
not provided 17 4 54 44 54 158
Leydig cell agenesis 16 7 41 12 13 87
Gonadotropin-independent familial sexual precocity 11 2 26 9 30 77
Hypergonadotropic hypogonadism 0 0 7 17 10 34
Inborn genetic diseases 0 0 33 1 0 34
not specified 0 0 4 4 7 15
LHCGR-related disorder 1 3 2 6 2 14
Leydig cell agenesis; Gonadotropin-independent familial sexual precocity 2 6 1 0 1 10
Luteinizing hormone resistance, female 4 0 0 0 0 4
Leydig cell hypoplasia, type II 3 0 0 0 0 3
Precocious puberty in males 1 1 0 0 0 2
See cases 0 1 1 0 0 2
46,XY disorder of sex development 0 0 1 0 0 1
Leydig cell adenoma, somatic, with male-limited precocious puberty 1 0 0 0 0 1
Leydig hypoplasia, type I 1 0 0 0 0 1
Luteinizing hormone/choriogonadotropin receptor, lq variant 1 0 0 0 0 1
Pseudohermaphroditism 1 0 0 0 0 1
STON1-GTF2A1L-related disorder 0 0 0 1 0 1

Submitter and significance breakdown #

Total submitters: 36
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Submitter pathogenic likely pathogenic uncertain significance likely benign benign total
Labcorp Genetics (formerly Invitae), Labcorp 13 2 35 30 17 97
GeneDx 3 1 16 10 43 73
Illumina Laboratory Services, Illumina 0 0 38 21 30 62
Ambry Genetics 0 0 33 1 0 34
OMIM 27 0 0 0 0 27
Breakthrough Genomics, Breakthrough Genomics 0 0 1 3 22 26
PreventionGenetics, part of Exact Sciences 1 3 2 7 5 18
Athena Diagnostics 3 0 2 0 5 10
Fulgent Genetics, Fulgent Genetics 1 6 1 0 1 9
Genetic Services Laboratory, University of Chicago 1 0 2 4 1 8
Women's Health and Genetics/Laboratory Corporation of America, LabCorp 3 1 2 1 1 8
Clinical Molecular Genetics Laboratory, Johns Hopkins All Children's Hospital 6 1 0 0 0 7
CeGaT Center for Human Genetics Tuebingen 0 0 1 5 0 6
Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein 0 3 1 0 0 4
Eurofins Ntd Llc (ga) 0 0 2 0 1 3
Joint Genome Diagnostic Labs from Nijmegen and Maastricht, Radboudumc and MUMC+ 0 0 0 0 3 3
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen 0 0 0 0 3 3
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center 0 0 0 0 3 3
Revvity Omics, Revvity 1 1 0 0 0 2
Equipe Genetique des Anomalies du Developpement, Université de Bourgogne 0 2 0 0 0 2
Department of Pathology and Laboratory Medicine, Sinai Health System 1 0 1 0 0 2
Victorian Clinical Genetics Services, Murdoch Childrens Research Institute 1 0 0 0 0 1
Genomic Medicine Center of Excellence, King Faisal Specialist Hospital and Research Centre 0 1 0 0 0 1
Institute for Human Genetics and Genomic Medicine, Uniklinik RWTH Aachen 0 1 0 0 0 1
Medical Molecular Genetics Department, National Research Center 1 0 0 0 0 1
Centre for Mendelian Genomics, University Medical Centre Ljubljana 0 0 1 0 0 1
Magee Womens Research Institute, University of Pittsburgh Medical Center 0 1 0 0 0 1
Institute of Human Genetics, University Hospital Muenster 0 0 1 0 0 1
AiLife Diagnostics, AiLife Diagnostics 0 0 1 0 0 1
Dr. med. U. Finckh, Human Genetics, Eurofins MVZ 0 0 1 0 0 1
3billion 1 0 0 0 0 1
Pediatric Endocrinology Clinic, Ege University School of Medicine 1 0 0 0 0 1
Neuberg Centre For Genomic Medicine, NCGM 0 0 1 0 0 1
Genomics England Pilot Project, Genomics England 0 1 0 0 0 1
Department for BioMedical Research, Inselspital, Bern University Hospital, University of Bern 0 0 1 0 0 1
MVZ Medizinische Genetik Mainz 0 0 1 0 0 1

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