ClinVar Miner

Variants studied for congenital bile acid synthesis defect

Included ClinVar conditions (10):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign not provided total
25 13 311 140 48 2 520

Gene and significance breakdown #

Total genes and gene combinations: 11
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Gene or gene combination pathogenic likely pathogenic uncertain significance likely benign benign not provided total
AMACR, C1QTNF3-AMACR 2 1 212 120 16 0 339
AKR1D1 8 7 73 11 20 0 115
HSD3B7 7 2 9 0 2 0 20
CYP7B1 3 1 9 0 1 2 16
ACOX2 4 2 3 2 2 0 11
AMACR, C1QTNF3-AMACR, SLC45A2 0 0 0 6 4 0 9
ABCD3 1 0 0 1 3 0 5
AMACR 0 0 2 0 0 0 2
AGXT2, AMACR, BRIX1, C1QTNF3, DNAJC21, PRLR, RAD1, RAI14, SLC45A2, TTC23L 0 0 1 0 0 0 1
AMACR, BRIX1, C1QTNF3, DNAJC21, RAD1, RAI14, TTC23L 0 0 1 0 0 0 1
CYP7B1, LOC130000507 0 0 1 0 0 0 1

Submitter and significance breakdown #

Total submitters: 24
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Submitter pathogenic likely pathogenic uncertain significance likely benign benign not provided total
Invitae 1 0 174 110 14 0 299
Illumina Laboratory Services, Illumina 1 0 118 27 33 0 179
OMIM 18 0 0 0 0 0 18
Baylor Genetics 1 0 12 0 0 0 13
Genome-Nilou Lab 0 0 0 0 13 0 13
Fulgent Genetics, Fulgent Genetics 2 2 6 2 0 0 12
Revvity Omics, Revvity 1 2 4 0 0 0 7
Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center 3 2 2 0 0 0 7
Neuberg Centre For Genomic Medicine, NCGM 0 3 3 0 0 0 6
Mendelics 0 1 2 0 2 0 5
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories 0 1 0 1 1 0 3
3billion 2 0 1 0 0 0 3
MGZ Medical Genetics Center 0 1 1 0 0 0 2
Genomic Research Center, Shahid Beheshti University of Medical Sciences 2 0 0 0 0 0 2
New York Genome Center 0 1 1 0 0 0 2
GenomeConnect - Invitae Patient Insights Network 0 0 0 0 0 2 2
Valdecilla Biomedical Research Institute, Instituto de Salud Carlos III 0 2 0 0 0 0 2
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine 0 1 0 0 0 0 1
Institute of Medical Genetics and Genomics, Sir Ganga Ram Hospital 0 0 1 0 0 0 1
Centre for Inherited Metabolic Diseases, Karolinska University Hospital 0 1 0 0 0 0 1
Women's Health and Genetics/Laboratory Corporation of America, LabCorp 0 1 0 0 0 0 1
Mayo Clinic Laboratories, Mayo Clinic 0 0 1 0 0 0 1
Biochemical Molecular Genetic Laboratory, King Abdulaziz Medical City 0 0 1 0 0 0 1
Al Jalila Children's Genomics Center, Al Jalila Childrens Speciality Hospital 0 0 0 1 0 0 1

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