ClinVar Miner

Variants studied for papillary adenocarcinoma

Included ClinVar conditions (8):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign other not provided total
16 110 168 41 65 1 2 390

Gene and significance breakdown #

Total genes and gene combinations: 31
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Gene or gene combination pathogenic likely pathogenic uncertain significance likely benign benign other not provided total
MET 8 1 151 40 64 0 1 253
TP53 1 61 0 0 0 0 0 62
MTOR 1 9 0 1 0 0 0 11
PIK3CA 0 10 0 0 0 0 0 10
COMETT, MET 0 0 7 0 1 0 0 8
LOC107303340, VHL 2 3 0 0 0 0 0 5
NRAS 0 5 0 0 0 0 0 5
NFE2L2 0 4 0 0 0 0 0 4
PTEN 0 4 0 0 0 0 0 4
ELOC 0 3 0 0 0 0 0 3
ATM, C11orf65 1 0 1 0 0 0 0 2
NKX2-1, SFTA3 1 0 1 0 0 0 0 2
RHEB 0 2 0 0 0 0 0 2
RINT1 0 2 0 0 0 0 0 2
ASZ1, CAPZA2, CFTR, LOC111365177, LOC111674463, LOC111674464, LOC111674465, LOC111674466, LOC111674476, LOC111674478, LOC113219431, LOC113219432, LOC113219433, LOC113219434, LOC113219439, LOC113219440, LOC113219442, LOC113219443, LOC113219444, LOC113219445, LOC113219446, LOC113219447, LOC116186911, LOC123956215, LOC126860157, LOC126860158, LOC126860159, LOC129999177, LOC129999178, LOC129999179, LOC129999180, LOC129999181, LOC129999182, LOC129999183, LOC129999184, LOC129999185, LOC129999186, LOC129999187, LOC129999188, MET, MIR6132, ST7, ST7-OT3, ST7-OT4, WNT2 0 0 1 0 0 0 0 1
ASZ1, CAPZA2, CFTR, MET, RNU2-1, ST7, ST7-OT3, ST7-OT4, WNT2 0 0 1 0 0 0 0 1
BRAF 1 0 0 0 0 0 1 1
BRCA1, LOC126862571 1 0 0 0 0 0 0 1
BRCA2 0 1 0 0 0 0 0 1
CTNNB1, LOC126806659 0 0 0 0 0 1 0 1
KRAS 0 1 0 0 0 0 0 1
LIG4 0 1 0 0 0 0 0 1
LOC111365177, LOC113219432, LOC126860158, MET 0 0 1 0 0 0 0 1
MSH2 0 0 1 0 0 0 0 1
PALB2 0 0 1 0 0 0 0 1
PCM1 0 0 1 0 0 0 0 1
PRCC 0 0 1 0 0 0 0 1
SDHB 0 0 1 0 0 0 0 1
SF3B1 0 1 0 0 0 0 0 1
SF3B2 0 1 0 0 0 0 0 1
VHL 0 1 0 0 0 0 0 1

Submitter and significance breakdown #

Total submitters: 29
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Submitter pathogenic likely pathogenic uncertain significance likely benign benign other not provided total
Illumina Laboratory Services, Illumina 0 0 67 15 58 0 0 140
Database of Curated Mutations (DoCM) 0 104 0 0 0 0 1 105
Mendelics 2 0 40 18 4 0 0 64
Fulgent Genetics, Fulgent Genetics 0 0 23 1 0 0 0 24
St. Jude Molecular Pathology, St. Jude Children's Research Hospital 0 1 20 0 1 0 0 22
KCCC/NGS Laboratory, Kuwait Cancer Control Center 0 0 0 5 14 0 0 19
Labcorp Genetics (formerly Invitae), Labcorp 0 0 14 3 0 0 0 17
OMIM 11 0 0 0 0 0 0 11
Baylor Genetics 0 0 3 0 0 0 0 3
CSER _CC_NCGL, University of Washington 0 0 2 0 0 0 0 2
3DMed Clinical Laboratory Inc 1 1 0 0 0 0 0 2
Dept. of Medical Genetics, The Key Laboratory of Geriatrics, Beijing Institute of Geriatrics, Institute of Geriatric Medicine, Chinese Academy of Medical Sciences, Beijing Hospital/National Center of Gerontology of National Health Commission 0 2 0 0 0 0 0 2
Institute of Human Genetics, University of Goettingen 0 0 1 0 0 0 0 1
Institute of Human Genetics, Cologne University 0 0 1 0 0 0 0 1
MGZ Medical Genetics Center 0 0 1 0 0 0 0 1
Soonchunhyang University Bucheon Hospital, Soonchunhyang University Medical Center 0 0 1 0 0 0 0 1
Donald Williams Parsons Laboratory, Baylor College of Medicine 0 0 0 0 0 1 0 1
Centre for Mendelian Genomics, University Medical Centre Ljubljana 0 0 1 0 0 0 0 1
Kamineni Academy of Medical Sciences & Research Centre, Kamineni Hospitals 0 1 0 0 0 0 0 1
Genetics and Molecular Pathology, SA Pathology 0 0 0 0 1 0 0 1
Institute of Human Genetics, University of Leipzig Medical Center 0 0 0 1 0 0 0 1
Department of Pathology and Laboratory Medicine, Sinai Health System 0 0 1 0 0 0 0 1
Cancer medicine, Gaomi People's Hospital 1 0 0 0 0 0 0 1
Myriad Genetics, Inc. 0 1 0 0 0 0 0 1
University Health Network, Princess Margaret Cancer Centre 1 0 0 0 0 0 0 1
GenomeConnect - Invitae Patient Insights Network 0 0 0 0 0 0 1 1
Neuberg Centre For Genomic Medicine, NCGM 0 0 1 0 0 0 0 1
Department of Human Genetics, Hannover Medical School 0 0 1 0 0 0 0 1
Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein 0 0 1 0 0 0 0 1

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