ClinVar Miner

Variants studied for psoriasis

Included ClinVar conditions (7):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign risk factor not provided total
24 11 715 495 117 2 3 1334

Gene and significance breakdown #

Total genes and gene combinations: 11
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Gene or gene combination pathogenic likely pathogenic uncertain significance likely benign benign risk factor not provided total
CARD14 8 2 381 266 50 0 0 704
CARD14, SGSH 0 0 167 120 32 0 1 316
IL36RN 15 7 102 63 23 0 2 188
CARD14, LOC126862662, SGSH 0 0 62 43 10 0 0 115
AP1S3 0 0 0 3 1 2 0 4
CARD14, CCDC40, EIF4A3, GAA 0 0 2 0 0 0 0 2
C1QTNF1, CANT1, CARD14, CBX2, CBX4, CBX8, CCDC40, EIF4A3, ENGASE, ENPP7, GAA, LGALS3BP, RBFOX3, RNF213, SGSH, SLC26A11, TBC1D16, TIMP2 0 0 1 0 0 0 0 1
IL17RA 0 1 0 0 0 0 0 1
IL1F10, IL1RN, IL36RN 1 0 0 0 0 0 0 1
IL1F10, IL36RN 0 1 0 0 0 0 0 1
LPIN2 0 0 0 0 1 0 0 1

Submitter and significance breakdown #

Total submitters: 32
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Submitter pathogenic likely pathogenic uncertain significance likely benign benign risk factor not provided total
Labcorp Genetics (formerly Invitae), Labcorp 14 6 664 482 89 0 0 1255
Illumina Laboratory Services, Illumina 1 1 38 5 21 0 0 66
Fulgent Genetics, Fulgent Genetics 0 0 8 7 1 0 0 16
OMIM 12 0 0 0 0 2 0 14
Genome-Nilou Lab 0 0 0 0 12 0 0 12
Department of Pathology and Laboratory Medicine, Sinai Health System 1 1 4 0 0 0 0 6
Clinical Genomics, Uppaluri K&H Personalized Medicine Clinic 0 0 6 0 0 0 0 6
Center for Genomics, Ann and Robert H. Lurie Children's Hospital of Chicago 0 0 3 1 0 0 0 4
Genomic Medicine Center of Excellence, King Faisal Specialist Hospital and Research Centre 0 0 2 0 0 0 0 2
GenomeConnect, ClinGen 0 0 0 0 0 0 2 2
Juno Genomics, Hangzhou Juno Genomics, Inc 2 0 0 0 0 0 0 2
Al Jalila Children’s Genomics Center, Al Jalila Childrens Speciality Hospital 0 0 0 1 1 0 0 2
Baylor Genetics 1 0 0 0 0 0 0 1
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine 0 1 0 0 0 0 0 1
Revvity Omics, Revvity 1 0 0 0 0 0 0 1
MGZ Medical Genetics Center 0 0 1 0 0 0 0 1
Mendelics 1 0 0 0 0 0 0 1
Victorian Clinical Genetics Services, Murdoch Childrens Research Institute 1 0 0 0 0 0 0 1
Clinical Genomics Laboratory, Washington University in St. Louis 0 0 1 0 0 0 0 1
Nemer Genomics and Translation Biomedicine Lab, American University of Beirut 0 1 0 0 0 0 0 1
Soonchunhyang University Bucheon Hospital, Soonchunhyang University Medical Center 0 0 1 0 0 0 0 1
Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India 1 0 0 0 0 0 0 1
Genetics and Molecular Pathology, SA Pathology 0 0 1 0 0 0 0 1
Seattle Children's Hospital Molecular Genetics Laboratory, Seattle Children's Hospital 1 0 0 0 0 0 0 1
Broad Center for Mendelian Genomics, Broad Institute of MIT and Harvard 0 0 0 0 1 0 0 1
Reproductive Health Research and Development, BGI Genomics 1 0 0 0 0 0 0 1
Zotz-Klimas Genetics Lab, MVZ Zotz Klimas 0 1 0 0 0 0 0 1
New York Genome Center 0 0 1 0 0 0 0 1
Beijing Key Laboratry for Genetics of Birth Defects, Beijing Children's Hospital 0 1 0 0 0 0 0 1
GenomeConnect - Invitae Patient Insights Network 0 0 0 0 0 0 1 1
Department of Human Genetics, Hannover Medical School 0 1 0 0 0 0 0 1
Medical Laboratory Center, Huzhou Maternal and Child Health Hospital 1 0 0 0 0 0 0 1

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