ClinVar Miner

Variants studied for temporal lobe epilepsy

Included ClinVar conditions (10):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign not provided total
65 31 1430 1382 198 15 3037

Gene and significance breakdown #

Total genes and gene combinations: 14
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Gene or gene combination pathogenic likely pathogenic uncertain significance likely benign benign not provided total
RELN 36 17 1013 1040 152 7 2207
RELN, SLC26A5 5 1 225 235 25 1 474
LOC126860130, RELN, SLC26A5 2 1 37 50 7 1 95
LGI1 14 9 33 3 1 6 64
GAL 1 0 35 13 5 0 54
LOC126860131, RELN 0 0 17 33 5 0 54
CPA6 2 0 37 1 2 0 41
ARFGEF1-DT, CPA6 1 0 29 5 1 0 35
MICAL1 1 2 2 2 0 0 7
DNAJC2, PMPCB, PSMC2, RELN, SLC26A5 1 0 1 0 0 0 2
ANO4 0 1 0 0 0 0 1
CEP55, FFAR4, FRA10AC1, LGI1, MYOF, PDE6C, RBP4 1 0 0 0 0 0 1
GRIN2A 0 0 1 0 0 0 1
KAT6B 1 0 0 0 0 0 1

Submitter and significance breakdown #

Total submitters: 35
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Submitter pathogenic likely pathogenic uncertain significance likely benign benign not provided total
Labcorp Genetics (formerly Invitae), Labcorp 40 15 1254 1357 192 0 2858
Fulgent Genetics, Fulgent Genetics 0 1 64 23 3 0 91
Illumina Laboratory Services, Illumina 0 0 68 8 3 0 79
New York Genome Center 0 0 21 0 0 0 21
OMIM 19 0 0 0 0 0 19
GeneReviews 1 0 0 0 0 13 14
Institute of Human Genetics, University of Leipzig Medical Center 1 5 8 0 0 0 14
Centre for Mendelian Genomics, University Medical Centre Ljubljana 0 1 12 0 0 0 13
Baylor Genetics 0 1 9 0 0 0 10
Center for Genomics, Ann and Robert H. Lurie Children's Hospital of Chicago 0 0 9 0 0 0 9
Neuberg Centre For Genomic Medicine, NCGM 0 0 7 0 0 0 7
Centogene AG - the Rare Disease Company 0 1 3 0 0 0 4
Mayo Clinic Laboratories, Mayo Clinic 0 0 3 0 0 0 3
Victorian Clinical Genetics Services, Murdoch Childrens Research Institute 0 0 3 0 0 0 3
Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center 0 0 3 0 0 0 3
Juno Genomics, Hangzhou Juno Genomics, Inc 0 1 2 0 0 0 3
Genome-Nilou Lab 0 0 0 0 3 0 3
Institute of Medical Genetics and Applied Genomics, University Hospital Tübingen 2 0 0 0 0 0 2
Génétique des Maladies du Développement, Hospices Civils de Lyon 0 1 1 0 0 0 2
Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein 0 1 1 0 0 0 2
MGZ Medical Genetics Center 0 0 1 0 0 0 1
Women's Health and Genetics/Laboratory Corporation of America, LabCorp 1 0 0 0 0 0 1
Institute of Experimental Medicine, Department of Genetics, Istanbul University 1 0 0 0 0 0 1
Center of Genomic medicine, Geneva, University Hospital of Geneva 0 0 1 0 0 0 1
Center For Human Genetics And Laboratory Diagnostics, Dr. Klein, Dr. Rost And Colleagues 0 0 1 0 0 0 1
Institute of Human Genetics, University Hospital of Duesseldorf 0 0 1 0 0 0 1
Institute of Medical Genetics, University of Zurich 0 1 0 0 0 0 1
GenomeConnect, ClinGen 0 0 0 0 0 1 1
Biochemical Molecular Genetic Laboratory, King Abdulaziz Medical City 0 1 0 0 0 0 1
Clinical Genomics Laboratory, Stanford Medicine 0 0 1 0 0 0 1
Dr. med. U. Finckh, Human Genetics, Eurofins MVZ 0 0 1 0 0 0 1
GenomeConnect - Invitae Patient Insights Network 0 0 0 0 0 1 1
Department of Neurology, Hunan Children's Hospital 1 0 0 0 0 0 1
Human Genetics Bochum, Ruhr University Bochum 0 1 0 0 0 0 1
Key Laboratory of Neurobehavioral Science for Children, Children's Hospital Affiliated of Zhengzhou University 0 1 0 0 0 0 1

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