ClinVar Miner

Variants studied for Tangier disease

Included ClinVar conditions (3):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign total
18 3 181 37 63 298

Gene and significance breakdown #

Total genes and gene combinations: 7
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Gene or gene combination pathogenic likely pathogenic uncertain significance likely benign benign total
ABCA1 17 3 92 23 41 172
ABCA1, NIPSNAP3B 1 0 75 13 18 107
ABCA1, LOC105376196 0 0 10 0 2 12
ABCA1, LOC105376196, LOC130002275 0 0 2 0 2 4
ABCA1, LOC105376196, LOC130002274 0 0 1 0 0 1
ABCA1, LOC121331340 0 0 1 0 0 1
APOA1 0 0 0 1 0 1

Submitter and significance breakdown #

Total submitters: 12
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Submitter pathogenic likely pathogenic uncertain significance likely benign benign total
Illumina Laboratory Services, Illumina 0 0 160 34 60 254
New York Genome Center 0 1 18 0 0 19
OMIM 16 0 0 0 0 16
Genome-Nilou Lab 0 0 0 0 6 6
Fulgent Genetics, Fulgent Genetics 0 0 0 3 2 5
Baylor Genetics 0 1 3 0 0 4
Women's Health and Genetics/Laboratory Corporation of America, LabCorp 1 1 0 0 0 2
Centogene AG - the Rare Disease Company 0 0 1 0 0 1
Mendelics 0 0 0 0 1 1
Genomic Research Center, Shahid Beheshti University of Medical Sciences 0 0 1 0 0 1
Genomics, Clalit Research Institute, Clalit Health Care 1 0 0 0 0 1
Molecular Genetics, Royal Melbourne Hospital 0 0 0 1 0 1

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