ClinVar Miner

Variants studied for ataxia telangiectasia

Included ClinVar conditions (6):
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign not provided total
1968 643 6588 3766 241 52 12673

Gene and significance breakdown #

Total genes and gene combinations: 19
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Gene or gene combination pathogenic likely pathogenic uncertain significance likely benign benign not provided total
ATM 1230 392 4070 2396 144 23 7875
ATM, C11orf65 717 245 2499 1370 96 28 4750
ATM, C11orf65, LOC128772356, LOC129390354 7 3 3 0 0 0 13
ATM, C11orf65, LOC129390354 4 3 3 0 0 0 10
ATM, LOC130006700 0 0 5 0 1 0 6
ATM, C11orf65, LOC128772356, LOC129390352, LOC129390353, LOC129390354 1 0 2 0 0 0 3
ACAT1, ATM, NPAT 1 0 1 0 0 0 2
ATM, LOC128772356, LOC129390352, LOC129390353 0 0 2 0 0 0 2
BRAF 2 0 0 0 0 0 2
AASDHPPT, ACAT1, ALG9, ALKBH8, AMOTL1, ANGPTL5, ANKRD49, ARHGAP20, ARHGAP42, ATM, BIRC2, BIRC3, BTG4, C11orf52, C11orf65, C11orf87, CARD16, CARD17, CARD18, CASP1, CASP12, CASP4, CASP5, CCDC82, CEP126, CEP57, CFAP300, CFAP68, CNTN5, CRYAB, CUL5, CWC15, CWF19L2, DCUN1D5, DDI1, DDX10, DIXDC1, DLAT, DYNC2H1, ELMOD1, ENDOD1, EXPH5, FAM76B, FDX1, FDXACB1, FUT4, GRIA4, GUCY1A2, HOATZ, HSPB2, JRKL, KBTBD3, KDM4D, KDM4E, LAYN, MAML2, MIR34B, MIR34BHG, MIR34C, MMP1, MMP10, MMP12, MMP13, MMP20, MMP27, MMP3, MMP7, MMP8, MRE11, MSANTD4, MTMR2, NKAPD1, NPAT, PDGFD, PGR, PIH1D2, PIWIL4, POGLUT3, POU2AF1, POU2AF2, POU2AF3, PPP2R1B, RAB39A, RDX, SDHD, SESN3, SIK2, SLC35F2, SLN, SRSF8, TIMM8B, TMEM123, TMEM133, TRPC6, YAP1, ZC3H12C 1 0 0 0 0 0 1
ACAT1, ATM, C11orf65, EXPH5, NPAT, POGLUT3 0 0 1 0 0 0 1
ACAT1, ATM, CUL5, NPAT, RAB39A 1 0 0 0 0 0 1
ATM, C11orf65, LOC128772356, LOC129390352, LOC129390353, LOC129390354, LOC130006700, LOC130006701, LOC130006702, LOC130006703 1 0 0 0 0 0 1
ATM, C11orf65, POGLUT3 0 0 1 0 0 0 1
ATM, LOC128772354, LOC130006698, NPAT 1 0 0 0 0 0 1
ATM, LOC128772356 1 0 0 0 0 0 1
ATM, LOC129390352, LOC129390353 0 0 1 0 0 0 1
ATM, NPAT 1 0 0 0 0 0 1
MSH2 0 0 0 0 0 1 1

Submitter and significance breakdown #

Total submitters: 99
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Submitter pathogenic likely pathogenic uncertain significance likely benign benign not provided total
Labcorp Genetics (formerly Invitae), Labcorp 1915 332 6222 3672 171 0 12312
Natera, Inc. 103 14 1066 47 40 0 1270
Counsyl 42 218 163 51 8 0 482
Mendelics 34 11 166 59 49 0 319
Illumina Laboratory Services, Illumina 3 3 194 29 37 0 266
Fulgent Genetics, Fulgent Genetics 48 22 146 10 4 0 230
Women's Health and Genetics/Laboratory Corporation of America, LabCorp 137 53 0 0 0 0 190
Revvity Omics, Revvity 53 13 30 0 0 0 96
Genome-Nilou Lab 2 2 19 6 18 0 47
GenomeConnect - Invitae Patient Insights Network 0 0 0 0 0 40 40
Baylor Genetics 13 3 23 0 0 0 39
3billion 27 4 1 0 0 0 32
St. Jude Molecular Pathology, St. Jude Children's Research Hospital 2 0 21 2 0 0 25
Neuberg Centre For Genomic Medicine, NCGM 4 9 10 0 0 0 23
GeneReviews 13 0 0 0 0 8 21
Genome Diagnostics Laboratory, Amsterdam University Medical Center 0 0 0 6 13 0 19
Genome Diagnostics Laboratory, University Medical Center Utrecht 0 0 1 13 2 0 16
OMIM 13 0 1 0 0 0 14
Human Genome Sequencing Center Clinical Lab, Baylor College of Medicine 10 3 1 0 0 0 14
Clinical Genetics DNA and cytogenetics Diagnostics Lab, Erasmus MC, Erasmus Medical Center 0 0 4 8 1 0 13
Institute of Human Genetics Munich, Klinikum Rechts Der Isar, TU München 9 3 0 0 0 0 12
Center for Genomics, Ann and Robert H. Lurie Children's Hospital of Chicago 2 0 9 1 0 0 12
Center for Genomic Medicine, King Faisal Specialist Hospital and Research Center 5 4 0 1 1 0 11
Immunology, Asthma and Allergy Research Institute, Tehran University of Medical Sciences 9 2 0 0 0 0 11
Laboratory for Molecular Medicine, Mass General Brigham Personalized Medicine 5 5 0 0 0 0 10
Victorian Clinical Genetics Services, Murdoch Childrens Research Institute 8 0 2 0 0 0 10
Kasturba Medical College, Manipal, Kasturba Medical College, Manipal, Manipal Academy of Higher Education, Manipal, India 8 1 0 0 0 0 9
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories 2 0 3 2 1 0 8
Diagnostic Laboratory, Department of Genetics, University Medical Center Groningen 0 0 3 3 2 0 8
Laboratory of Medical Genetics, National & Kapodistrian University of Athens 6 1 0 0 0 0 7
MGZ Medical Genetics Center 4 1 1 0 0 0 6
Department of Pathology and Laboratory Medicine, Sinai Health System 0 0 4 2 0 0 6
Molecular Medicine for Neurodegenerative and Neuromuscular Diseases Unit, IRCCS Fondazione Stella Maris 5 1 0 0 0 0 6
Center of Genomic medicine, Geneva, University Hospital of Geneva 2 3 0 0 0 0 5
Genetics and Molecular Pathology, SA Pathology 5 0 0 0 0 0 5
DASA 4 1 0 0 0 0 5
Genetic Services Laboratory, University of Chicago 4 0 0 0 0 0 4
Foundation for Research in Genetics and Endocrinology, FRIGE's Institute of Human Genetics 2 2 0 0 0 0 4
Consultorio y Laboratorio de Neurogenética, Hospital JM Ramos Mejia 1 2 1 0 0 0 4
Department of Clinical Genetics, Copenhagen University Hospital, Rigshospitalet 2 1 0 0 0 0 3
Centogene AG - the Rare Disease Company 1 2 0 0 0 0 3
Division of Human Genetics, Children's Hospital of Philadelphia 3 0 0 0 0 0 3
HudsonAlpha Institute for Biotechnology, HudsonAlpha Institute for Biotechnology 2 1 0 0 0 0 3
GenomeConnect, ClinGen 0 0 0 0 0 3 3
Molecular Genetics, Royal Melbourne Hospital 3 0 0 0 0 0 3
Laboratorio de Genetica e Diagnostico Molecular, Hospital Israelita Albert Einstein 1 1 1 0 0 0 3
Greenwood Genetic Center Diagnostic Laboratories, Greenwood Genetic Center 2 0 0 0 0 0 2
Centre for Inherited Metabolic Diseases, Karolinska University Hospital 2 0 0 0 0 0 2
Genomic Research Center, Shahid Beheshti University of Medical Sciences 2 0 0 0 0 0 2
Center for Individualized Medicine, Mayo Clinic 1 1 0 0 0 0 2
Institute for Medical Genetics and Human Genetics, Charité - Universitätsmedizin Berlin 1 1 0 0 0 0 2
Molecular Genetics Department, Kulakov National Medical Research Center for Obstetrics, Gynecology and Perinatology 2 0 0 0 0 0 2
Manipal Hospitals, Manipal Hospital 0 1 1 0 0 0 2
Institute of Human Genetics, University Hospital of Duesseldorf 1 1 0 0 0 0 2
Institute of Human Genetics, University of Leipzig Medical Center 1 0 1 0 0 0 2
SIB Swiss Institute of Bioinformatics 0 0 1 0 1 0 2
Institute of Medical Genetics and Applied Genomics, University Hospital Tübingen 1 1 0 0 0 0 2
Pediatric Genomics Discovery Program, Yale University 1 1 0 0 0 0 2
Broad Center for Mendelian Genomics, Broad Institute of MIT and Harvard 1 0 1 0 0 0 2
HUSP Clinical Genetics Laboratory, Hospital Universitario San Pedro De Logroño (HUSP) 1 1 0 0 0 0 2
Johns Hopkins Genomics, Johns Hopkins University 2 0 0 0 0 0 2
University of Washington Department of Laboratory Medicine, University of Washington 1 1 0 0 0 0 2
Department of Rehabilitation Medicine, Incheon St. Mary’s Hospital, College of Medicine, The Catholic University of Korea 2 0 0 0 0 0 2
Institute for Genomic Statistics and Bioinformatics, University Hospital Bonn 2 0 0 0 0 0 2
Division of Genomic Medicine, Department of Advanced Medicine, Medical Research Institute, Kanazawa Medical University 2 0 0 0 0 0 2
Pars Genome Lab 0 0 0 2 0 0 2
Institute of Human Genetics, Clinical Exome/Genome Diagnostics Group, University Hospital Bonn 2 0 0 0 0 0 2
Suma Genomics, Suma Genomics 0 2 0 0 0 0 2
Research Unit of Clinical Medicine, Medical Research Center Oulu, University of Oulu 0 1 1 0 0 0 2
Institute of Immunology and Genetics Kaiserslautern 1 0 1 0 0 0 2
Breakthrough Genomics, Breakthrough Genomics 0 2 0 0 0 0 2
Center for Human Genetics, Inc, Center for Human Genetics, Inc 0 1 0 0 0 0 1
Institute of Human Genetics, University of Goettingen 0 0 1 0 0 0 1
Mayo Clinic Laboratories, Mayo Clinic 1 0 0 0 0 0 1
ClinVar Staff, National Center for Biotechnology Information (NCBI) 0 0 0 0 0 1 1
Laboratory of Molecular Oncology, N.N. Petrov Institute of Oncology 0 0 1 0 0 0 1
Hadassah Hebrew University Medical Center 0 1 0 0 0 0 1
Undiagnosed Diseases Network, NIH 0 0 1 0 0 0 1
Rady Children's Institute for Genomic Medicine, Rady Children's Hospital San Diego 1 0 0 0 0 0 1
Biochemical Molecular Genetic Laboratory, King Abdulaziz Medical City 1 0 0 0 0 0 1
Cancer Variant Interpretation Group UK, Institute of Cancer Research, London 1 0 0 0 0 0 1
Neurology, Jichi Medical University 1 0 0 0 0 0 1
NxGen MDx 0 1 0 0 0 0 1
Al Jalila Children’s Genomics Center, Al Jalila Childrens Speciality Hospital 0 0 0 0 1 0 1
Zotz-Klimas Genetics Lab, MVZ Zotz Klimas 1 0 0 0 0 0 1
Diagnostics Services (NGS), CSIR - Centre For Cellular And Molecular Biology 0 1 0 0 0 0 1
New York Genome Center 0 0 1 0 0 0 1
Dr. med. U. Finckh, Human Genetics, Eurofins MVZ 0 1 0 0 0 0 1
Lifecell International Pvt. Ltd 1 0 0 0 0 0 1
Genetica Medica Policlinico Modena, Policlinico di Modena 0 1 0 0 0 0 1
GenomeConnect - Brain Gene Registry 0 0 0 0 0 1 1
Department of Human Genetics, Hannover Medical School 0 0 1 0 0 0 1
Department of Neurology, Xijing Hospital, Fourth Military Medical University 0 0 1 0 0 0 1
Neurogenomics Lab, Neuroscience Institute, University Of Cape Town 0 1 0 0 0 0 1
COMBGENE, University of Calgary 1 0 0 0 0 0 1
Clinical Laboratory Sciences Program (CLSP), King Saud bin Abdulaziz University for Health Sciences (KSAU-HS) 1 0 0 0 0 0 1
KCCC/NGS Laboratory, Kuwait Cancer Control Center 1 0 0 0 0 0 1
Solve-RD Consortium 0 1 0 0 0 0 1
Dr.Nikuei Genetic Center 0 0 0 0 1 0 1

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