ClinVar Miner

Variants from Institute of Molecular and Cell Biology, University of Tartu

Location: Estonia — Primary collection method: case-control
Minimum submission review status: Collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than one submission, it may be counted in more than one significance column. If this is the case, the total number of variants will be less than the sum of the other cells.

pathogenic likely pathogenic uncertain significance likely benign benign not provided total
0 0 0 0 0 593 593

Gene and significance breakdown #

Total genes and gene combinations: 282
Download table as spreadsheet
Gene or gene combination not provided total
​intergenic 256 256
ERBB4 5 5
ZDHHC11 4 4
CFHR4 3 3
DISC1, LINC00582, TSNAX-DISC1 3 3
LRRC69 3 3
MTUS1 3 3
PSG1, PSG11, PSG6, PSG7 3 3
RBFOX3 3 3
SLC2A14, SLC2A3 3 3
AADAC, AADACL2 2 2
ABCC4 2 2
AMY1A, AMY2A 2 2
ARL17A, ARL17B, KANSL1, LOC112533643, LRRC37A 2 2
ARL17B, KANSL1 2 2
CAT 2 2
CCDC3, LOC107275223 2 2
CNOT2 2 2
CNTN5 2 2
CTNNA3 2 2
GOLPH3, PDZD2 2 2
HPN 2 2
IMMP2L 2 2
KIF26B 2 2
LINC01237, LINC01238, LINC01880, LINC01881, LOC285097 2 2
LINC01237, LINC01880, LINC01881, LOC285097 2 2
LINC02055 2 2
LINC02316, LINC02328 2 2
LOC108942766, NANOG, SLC2A14, SLC2A3 2 2
LOC730100 2 2
MGAM 2 2
NIPA1 2 2
NKAIN2 2 2
NLGN1 2 2
NRDE2 2 2
PCF11 2 2
PIEZO2 2 2
PLCH2 2 2
PSG1, PSG11, PSG2, PSG4, PSG5, PSG6, PSG7 2 2
REV1 2 2
SLC35F2 2 2
STXBP5 2 2
TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D 2 2
TRA 2 2
TRH-GTG2-1 2 2
ABCD3, F3, MIR12133, SLC44A3 1 1
ABR, BHLHA9, TRARG1 1 1
ACACB 1 1
ACSL3 1 1
ACY3, ALDH3B2, C11orf72, NDUFV1, NUDT8, TBX10 1 1
ADGRG7, TFG 1 1
AGAP10, AGAP4, ANXA8L1, FAM25E, GPRIN2, NPY4R, SYT15, WASHC2C 1 1
AGAP10, ANXA8L1, NPY4R 1 1
AGBL4, AGBL4-IT1 1 1
AGO1 1 1
AGPAT4, MAP3K4 1 1
AKAP12 1 1
ANAPC4, PI4K2B, SEPSECS, ZCCHC4 1 1
ANKS1B 1 1
ANO9, PKP3, SIGIRR 1 1
ANTXR2 1 1
AOC1 1 1
APBA1 1 1
APOBEC3D, APOBEC3F 1 1
ARHGAP11B, CHRFAM7A, GOLGA8H, GOLGA8J, GOLGA8Q, GOLGA8R, GOLGA8T, LINC02249, LOC100996413, LOC102725021, LOC106736464, LOC106736465, LOC106736468, LOC106736476, LOC106736480, LOC106783506 1 1
ARHGAP24 1 1
ARID4A 1 1
ARL17B, KANSL1, LRRC37A 1 1
ARPP21 1 1
ASCL3 1 1
ATAD3B, ATAD3C 1 1
ATP8B3 1 1
B4GALNT4, IFITM1, IFITM2, IFITM3, IFITM5, NLRP6, PGGHG, PKP3 1 1
BAIAP2L1, BRI3 1 1
BAZ2B, LOC643072 1 1
BBS9 1 1
BPIFA3 1 1
C17orf112, LINC02089 1 1
C2orf80 1 1
C8orf48, DLC1, LOC102725080 1 1
CACNA1C 1 1
CACNA1I 1 1
CASP12 1 1
CATSPER2, STRC 1 1
CBWD1, DOCK8, FOXD4, LINC01388, LOC110120718, PGM5P3 1 1
CCDC102B 1 1
CCDC178 1 1
CD160, PDZK1, RNF115 1 1
CDCA7L, DNAH11 1 1
CDK11A, SLC35E2A 1 1
CDK11A, SLC35E2A, SLC35E2B 1 1
CELA2A 1 1
CELA2A, CELA2B 1 1
CFAP46, INPP5A, NKX6-2 1 1
CHRM3 1 1
CNTN6, LINC01266 1 1
CNTNAP2 1 1
COL21A1 1 1
CRIP1, IGH, IGHA1, IGHA2, IGHD, IGHD3-3, IGHE, IGHG1, IGHG2, IGHG3, IGHG4, IGHM, IGHV3-23, TEDC1, TMEM121 1 1
CRTAM 1 1
CSMD1 1 1
CTDSPL 1 1
CTNS, EMC6, P2RX5, P2RX5-TAX1BP3, SHPK, TAX1BP3, TRPV1 1 1
CYB5R4, LOC113175019, RIPPLY2 1 1
CYP2A6, LOC110673974 1 1
CYP2C19, LOC110599570, LOC111982881 1 1
CYP2E1, LOC110599585, MTG1, SPRN, SYCE1 1 1
CYP2E1, LOC110599585, SYCE1 1 1
DGCR5, DGCR6, DGCR9, FAM230F, HSERVPRODH, PRODH 1 1
DHRS4L1, DHRS4L2 1 1
DNAH3, LYRM1 1 1
DNAJB13, PAAF1, UCP2 1 1
DOCK4 1 1
DOCK8 1 1
DOCK8, KANK1 1 1
DOK6 1 1
DPH6 1 1
DPH6-DT 1 1
DPY19L2, LOC108720144 1 1
DTX2, UPK3B 1 1
EHD4, LOC105370792, SPTBN5 1 1
ELOVL6 1 1
EPHA3 1 1
EYS 1 1
FAM110C 1 1
FAM126B, NDUFB3 1 1
FAM20A 1 1
FCGR2A, HSPA6, TRG-GCC2-1, TRG-TCC2-6, TRL-CAG1-6 1 1
FGF12 1 1
FKBP15, SLC31A1 1 1
FPR2, FPR3, ZNF350, ZNF432, ZNF577, ZNF613, ZNF614, ZNF615, ZNF616, ZNF649, ZNF841 1 1
FRG1 1 1
FRG2C, LINC00960, LINC02018, LOC112935961, MIR1324 1 1
GALC 1 1
GALNT13 1 1
GK2, LINC00989, LINC01088, NAA11 1 1
GOLGA6L6, OR4M2, OR4N4, POTEB, POTEB2 1 1
GPR35 1 1
GRID1 1 1
GRID2 1 1
GRIK4 1 1
GRIN2A 1 1
GRK3, LRP5L 1 1
GRM5 1 1
GTF2F2, KCTD4, LOC101929259, TPT1 1 1
HCG26, HCP5, LINC01149, MICA, MICB-DT 1 1
HCG4B 1 1
HNRNPCL1, PRAMEF11 1 1
HRG 1 1
IGH, IGHA1, IGHA2, IGHD, IGHD3-3, IGHE, IGHG1, IGHG2, IGHG3, IGHG4, IGHM, IGHV3-23 1 1
IGH, IGHD3-3, IGHV3-23 1 1
ITSN1 1 1
IZUMO2, KCNC3, LOC111811967, LOC400710, MYH14, NAPSA, NR1H2, POLD1, SNAR-A10, SNAR-A11, SNAR-A14, SNAR-A4, SNAR-A5, SNAR-A6, SNAR-A7, SNAR-A8, SNAR-A9, SNAR-B1, SNAR-B2, SNAR-D, VRK3, ZNF473 1 1
JADE1, SCLT1 1 1
JRKL, LINC02737 1 1
KCCAT333 1 1
KIF23, LOC145694, PAQR5 1 1
KLHL1 1 1
KMT2C, LINC01003 1 1
KNG1 1 1
KRT6C 1 1
LINC00276 1 1
LINC00343 1 1
LINC00621 1 1
LINC00659, NTSR1 1 1
LINC00871 1 1
LINC01192 1 1
LINC01216 1 1
LINC01250 1 1
LINC01322 1 1
LINC01566, LOC112268173, LOC112441448 1 1
LINC01722 1 1
LINC01826 1 1
LINC01903, LOC643542 1 1
LINC01950 1 1
LINC01957, LOC101927078 1 1
LINC02018, LOC112935961 1 1
LINC02112 1 1
LINC02208 1 1
LINC02267 1 1
LINC02415 1 1
LINC02510, LINC02511 1 1
LINC02706, LINC02714, LOC283177 1 1
LINGO2 1 1
LMNTD1 1 1
LOC100133091, LOC108228209, POMZP3, SPDYE16, UPK3B 1 1
LOC100505915, LOC112340378, MIR3180-4, MIR6511B2, MPV17L, NPIPA5, PDXDC1, RRN3 1 1
LOC101928924, OCLN 1 1
LOC101929572, OR11H12, OR11H2, OR4K1, OR4K13, OR4K14, OR4K15, OR4K17, OR4K2, OR4K5, OR4L1, OR4M1, OR4N2, OR4N5, OR4Q3, POTEG, POTEM 1 1
LOC101929572, OR11H12, OR11H2, OR4K1, OR4K2, OR4K5, OR4M1, OR4N2, OR4Q3, POTEG, POTEM 1 1
LOC108281140, MEGF6 1 1
LOC110120572 1 1
LOC110673974 1 1
LOC111429611 1 1
LOC111828495, SAFB2, TINCR 1 1
LOC111828512, MOGAT1 1 1
LOC112340392, SULT1A1, SULT1A2 1 1
LOC112533660, PRKCA 1 1
LOC284344, PSG4, PSG5, PSG9 1 1
LRP1B 1 1
LRP5L 1 1
MACROD2 1 1
MAF 1 1
MAP4K3 1 1
MCTP1 1 1
MED13 1 1
MGC4859 1 1
MIR3910-1, MIR3910-2 1 1
MNDA, OR6N1 1 1
MRGPRX1 1 1
MSR1 1 1
MTR 1 1
MYO1D 1 1
NAIP 1 1
NEDD4L 1 1
NEFL, NEFM 1 1
NHSL1 1 1
NPIPB5 1 1
NRCAM 1 1
NRG3 1 1
NRXN1 1 1
OPRM1 1 1
OR2J2 1 1
OR4C12 1 1
OR4D6, OR5A1 1 1
OR4F15, OR4F6 1 1
PCDH15 1 1
PRKCA 1 1
PRKG1 1 1
PSG1, PSG11, PSG2, PSG4, PSG5, PSG6, PSG7, PSG9 1 1
PSG1, PSG6, PSG7 1 1
PSG4, PSG5 1 1
PTPRD 1 1
PWRN2 1 1
PWRN3 1 1
QRFPR 1 1
RFX3 1 1
RHD, RSRP1 1 1
RLN1, RLN2 1 1
RTP5 1 1
SCARB1 1 1
SDK1 1 1
SFMBT1 1 1
SGCD 1 1
SIK1 1 1
SLC10A2 1 1
SLC15A5 1 1
SLC26A7 1 1
SLCO1B1 1 1
SLFN11, SLFN12, SLFN13 1 1
SNHG14, SNORD115-4, SNORD115-5, SNORD115-6, SNORD115-7, SNORD115-8, SNORD115@ 1 1
SNTG1 1 1
SOX11 1 1
SPATA45 1 1
SPINT4, WFDC3 1 1
STAG1 1 1
SULT1A1 1 1
TACSTD2 1 1
TAFA2 1 1
TCF7L2 1 1
TM4SF20 1 1
TMEM231 1 1
TMEM72 1 1
TMTC2 1 1
TMX4 1 1
TOP3B 1 1
TP53TG3, TP53TG3B, TP53TG3C 1 1
TPTE 1 1
TRB 1 1
TRI-AAT2-1, TRI-AAT8-1, TRR-ACG2-4, TRS-CGA3-1, TRT-AGT2-2, TRV-AAC4-1 1 1
TRIM72 1 1
TRPM3 1 1
TUSC3 1 1
URGCP, URGCP-MRPS24 1 1
VIPR2 1 1
VWDE 1 1
ZNF385D 1 1
ZNF595, ZNF718 1 1
ZNF716 1 1
ZNF804B 1 1
ZRANB3 1 1
ZSWIM5 1 1

Condition and significance breakdown #

Total conditions: 5
Download table as spreadsheet
Condition not provided total
Normal pregnancy 226 226
Gestational diabetes mellitus uncontrolled 158 158
Preeclampsia 139 139
Large for gestational age 122 122
Small for gestational age 116 116

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