ClinVar Miner

Variants in gene AGRN with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
912 49 0 32 8 0 0 38

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 6 4
likely benign 6 0 32
benign 4 32 0

All variants with conflicting interpretations #

Total variants: 38
Download table as spreadsheet
NM_198576.4(AGRN):c.1058A>G (p.Gln353Arg) rs150359724
NM_198576.4(AGRN):c.1123G>T (p.Ala375Ser) rs138031468
NM_198576.4(AGRN):c.1198C>T (p.Arg400Trp) rs149636063
NM_198576.4(AGRN):c.1528G>A (p.Gly510Ser) rs138288952
NM_198576.4(AGRN):c.1603+19G>A rs115191992
NM_198576.4(AGRN):c.1660G>A (p.Val554Met) rs79016973
NM_198576.4(AGRN):c.1993G>A (p.Glu665Lys) rs143324306
NM_198576.4(AGRN):c.2025C>G (p.Gly675=) rs28484890
NM_198576.4(AGRN):c.2067G>A (p.Gln689=) rs139886237
NM_198576.4(AGRN):c.2406C>T (p.Gly802=) rs75774767
NM_198576.4(AGRN):c.2457G>C (p.Gly819=) rs112039851
NM_198576.4(AGRN):c.261C>T (p.Asp87=) rs6657048
NM_198576.4(AGRN):c.2690C>T (p.Ala897Val) rs116836855
NM_198576.4(AGRN):c.3077C>A (p.Thr1026Asn) rs3813188
NM_198576.4(AGRN):c.3264G>C (p.Leu1088Phe) rs150132566
NM_198576.4(AGRN):c.3404A>G (p.Gln1135Arg) rs142416636
NM_198576.4(AGRN):c.3465T>C (p.Ala1155=) rs146358566
NM_198576.4(AGRN):c.3516+10G>C rs76264143
NM_198576.4(AGRN):c.3570C>T (p.Arg1190=) rs75361935
NM_198576.4(AGRN):c.3732C>T (p.His1244=) rs536657086
NM_198576.4(AGRN):c.3866C>T (p.Pro1289Leu) rs139294803
NM_198576.4(AGRN):c.3964C>T (p.Arg1322Trp) rs184970403
NM_198576.4(AGRN):c.3972G>A (p.Pro1324=) rs201483077
NM_198576.4(AGRN):c.4131C>T (p.Phe1377=) rs368555478
NM_198576.4(AGRN):c.4298+11A>T rs369279324
NM_198576.4(AGRN):c.4352C>T (p.Pro1451Leu) rs144620006
NM_198576.4(AGRN):c.4452C>T (p.Thr1484=) rs75767981
NM_198576.4(AGRN):c.4540G>A (p.Ala1514Thr) rs111818381
NM_198576.4(AGRN):c.4740C>T (p.Arg1580=) rs115019873
NM_198576.4(AGRN):c.4839C>T (p.Cys1613=) rs113020870
NM_198576.4(AGRN):c.4996G>A (p.Val1666Ile) rs17160775
NM_198576.4(AGRN):c.5201G>A (p.Arg1734His) rs145444272
NM_198576.4(AGRN):c.526C>T (p.Leu176=) rs544749044
NM_198576.4(AGRN):c.5353G>A (p.Asp1785Asn) rs144245019
NM_198576.4(AGRN):c.5358T>C (p.Gly1786=) rs17160781
NM_198576.4(AGRN):c.5598C>T (p.Thr1866=) rs17778478
NM_198576.4(AGRN):c.67G>C (p.Val23Leu) rs201073369
NM_198576.4(AGRN):c.773C>T (p.Thr258Ile) rs200607541

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