ClinVar Miner

Variants in gene ATR with conflicting interpretations

See also:
Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
2894 137 0 49 15 0 2 61

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 4 2 0 0
likely pathogenic 4 0 0 0 0
uncertain significance 2 0 0 13 6
likely benign 0 0 13 0 45
benign 0 0 6 45 0

All variants with conflicting interpretations #

Total variants: 61
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_001184.4(ATR):c.7875G>A (p.Gln2625=) rs1802904 0.88595
NM_001184.4(ATR):c.5898+25T>G rs7620648 0.66679
NM_001184.4(ATR):c.1776T>A (p.Gly592=) rs2227930 0.63717
NM_001184.4(ATR):c.632T>C (p.Met211Thr) rs2227928 0.63625
NM_001184.4(ATR):c.5208T>C (p.Tyr1736=) rs2227931 0.34166
NM_001184.4(ATR):c.3726-47A>G rs73240314 0.13934
NM_001184.4(ATR):c.1885+39T>C rs73240318 0.10546
NM_001184.4(ATR):c.5460T>C (p.Tyr1820=) rs2227932 0.07623
NM_001184.4(ATR):c.3172-26T>A rs76852171 0.05061
NM_001184.4(ATR):c.4383-47A>G rs58348002 0.04498
NM_001184.4(ATR):c.5381-41C>T rs34502778 0.04288
NM_001184.4(ATR):c.3725+18A>G rs73864554 0.03416
NM_001184.4(ATR):c.946G>A (p.Val316Ile) rs28897764 0.01744
NM_001184.4(ATR):c.2875G>A (p.Val959Met) rs28910271 0.01643
NM_001184.4(ATR):c.4835A>G (p.Asn1612Ser) rs55894265 0.01275
NM_001184.4(ATR):c.891G>C (p.Lys297Asn) rs2229033 0.01036
NM_001184.4(ATR):c.5868C>T (p.Tyr1956=) rs112018640 0.01020
NM_001184.4(ATR):c.6339A>G (p.Val2113=) rs7635479 0.00964
NM_001184.4(ATR):c.268C>T (p.His90Tyr) rs28897763 0.00813
NM_001184.4(ATR):c.1328G>C (p.Arg443Thr) rs28367453 0.00450
NM_001184.4(ATR):c.423T>C (p.Ile141=) rs10935466 0.00416
NM_001184.4(ATR):c.4764C>T (p.Leu1588=) rs142240637 0.00415
NM_001184.4(ATR):c.4820G>A (p.Ser1607Asn) rs55724025 0.00414
NM_001184.4(ATR):c.6394T>G (p.Tyr2132Asp) rs28910273 0.00349
NM_001184.4(ATR):c.2290A>G (p.Lys764Glu) rs77208665 0.00340
NM_001184.4(ATR):c.7504-16A>G rs111927479 0.00279
NM_001184.4(ATR):c.816A>G (p.Ser272=) rs34685245 0.00211
NM_001184.4(ATR):c.2844A>C (p.Ala948=) rs147286949 0.00177
NM_001184.4(ATR):c.4576A>G (p.Ile1526Val) rs34124242 0.00145
NM_001184.4(ATR):c.2776T>C (p.Phe926Leu) rs141783863 0.00119
NM_001184.4(ATR):c.2637C>T (p.Ala879=) rs150512706 0.00105
NM_001184.4(ATR):c.7041+8G>A rs201106004 0.00104
NM_001184.4(ATR):c.4200A>T (p.Leu1400=) rs150562945 0.00101
NM_001184.4(ATR):c.5070C>T (p.Ala1690=) rs142881746 0.00092
NM_001184.4(ATR):c.5987T>C (p.Met1996Thr) rs150339560 0.00078
NM_001184.4(ATR):c.2226T>C (p.Cys742=) rs147895945 0.00071
NM_001184.4(ATR):c.993C>T (p.Asp331=) rs139379319 0.00058
NM_001184.4(ATR):c.2704T>C (p.Ser902Pro) rs146202702 0.00036
NM_001184.4(ATR):c.4405A>G (p.Thr1469Ala) rs78895258 0.00036
NM_001184.4(ATR):c.117A>G (p.Gln39=) rs56297030 0.00023
NM_001184.4(ATR):c.2688G>A (p.Leu896=) rs117926957 0.00021
NM_001184.4(ATR):c.483A>G (p.Arg161=) rs182268224 0.00021
NM_001184.4(ATR):c.1885+7G>A rs74282951 0.00013
NM_001184.4(ATR):c.3582-3T>C rs371344698 0.00011
NM_001184.4(ATR):c.6897+464C>G rs587777852 0.00010
NM_001184.4(ATR):c.7667C>G (p.Thr2556Ser) rs200490116 0.00007
NM_001184.4(ATR):c.3151C>T (p.Arg1051Cys) rs367641692 0.00005
NM_001184.4(ATR):c.7471G>A (p.Val2491Ile) rs556313656 0.00004
NM_001184.4(ATR):c.2503T>C (p.Leu835=) rs377134163 0.00003
NM_001184.4(ATR):c.7273C>T (p.Arg2425Ter) rs1310011888 0.00001
NM_001184.4(ATR):c.7504-17A>T rs565264162 0.00001
NM_001184.4(ATR):c.1358_1359del (p.His453fs) rs886044646
NM_001184.4(ATR):c.1491_1492insAA (p.Gln498fs)
NM_001184.4(ATR):c.1546A>G (p.Thr516Ala)
NM_001184.4(ATR):c.2320dup (p.Ile774fs) rs757500301
NM_001184.4(ATR):c.2831del (p.Ser944fs)
NM_001184.4(ATR):c.4153-21dup rs112116713
NM_001184.4(ATR):c.4852+21C>T rs587783332
NM_001184.4(ATR):c.5007T>C (p.Ile1669=) rs2108361083
NM_001184.4(ATR):c.5739-11_5739-4del rs797045404
NM_001184.4(ATR):c.7185A>G (p.Lys2395=) rs749700431

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