ClinVar Miner

Variants in gene FAT4 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic) 		Variants with a confidence conflict
(e.g. benign vs likely benign) 		Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects) 		Variants with a clinically significant conflict
(e.g. benign vs pathogenic) 		Variants with any conflict
2210 249 0 53 65 0 0 113

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 62 8
likely benign 62 0 53
benign 8 53 0

All variants with conflicting interpretations #

Total variants: 113
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_001291303.3(FAT4):c.1101A>G (p.Val367=) rs57692448 0.01498
NM_001291303.3(FAT4):c.14135C>G (p.Ser4712Cys) rs147662558 0.01304
NM_001291303.3(FAT4):c.13605G>A (p.Lys4535=) rs75469760 0.01048
NM_001291303.3(FAT4):c.10810A>C (p.Ile3604Leu) rs76491994 0.00978
NM_001291303.3(FAT4):c.8544C>T (p.Ser2848=) rs139132509 0.00802
NM_001291303.3(FAT4):c.12071G>A (p.Arg4024Gln) rs28515675 0.00726
NM_001291303.3(FAT4):c.4154T>C (p.Leu1385Ser) rs139883132 0.00597
NM_001291303.3(FAT4):c.14663C>G (p.Ala4888Gly) rs35340865 0.00551
NM_001291303.3(FAT4):c.6219A>G (p.Gln2073=) rs35355603 0.00545
NM_001291303.3(FAT4):c.12986A>G (p.Asp4329Gly) rs114234553 0.00519
NM_001291303.3(FAT4):c.6733G>A (p.Val2245Ile) rs112971995 0.00426
NM_001291303.3(FAT4):c.10853C>T (p.Thr3618Met) rs111423173 0.00407
NM_001291303.3(FAT4):c.2811G>T (p.Lys937Asn) rs112454576 0.00367
NM_001291303.3(FAT4):c.12855T>C (p.Asp4285=) rs78040862 0.00365
NM_001291303.3(FAT4):c.3658T>A (p.Ser1220Thr) rs181368820 0.00342
NM_001291303.3(FAT4):c.12070C>T (p.Arg4024Trp) rs138019311 0.00333
NM_001291303.3(FAT4):c.7358G>T (p.Ser2453Ile) rs72914988 0.00327
NM_001291303.3(FAT4):c.4303A>G (p.Ile1435Val) rs142747281 0.00288
NM_001291303.3(FAT4):c.13554G>A (p.Leu4518=) rs78235204 0.00277
NM_001291303.3(FAT4):c.14666G>A (p.Arg4889Lys) rs35845544 0.00261
NM_001291303.3(FAT4):c.7935C>T (p.Asp2645=) rs146157250 0.00244
NM_001291303.3(FAT4):c.5987A>G (p.Lys1996Arg) rs140055438 0.00242
NM_001291303.3(FAT4):c.1128G>A (p.Val376=) rs202216461 0.00236
NM_001291303.3(FAT4):c.524G>T (p.Arg175Leu) rs143534324 0.00217
NM_001291303.3(FAT4):c.7787T>C (p.Leu2596Ser) rs111501860 0.00216
NM_001291303.3(FAT4):c.13404G>A (p.Val4468=) rs149993049 0.00181
NM_001291303.3(FAT4):c.5921-14C>T rs190218898 0.00151
NM_001291303.3(FAT4):c.5275A>G (p.Ile1759Val) rs145639192 0.00145
NM_001291303.3(FAT4):c.10107A>G (p.Glu3369=) rs147646369 0.00140
NM_001291303.3(FAT4):c.3424G>A (p.Val1142Met) rs202188213 0.00140
NM_001291303.3(FAT4):c.3192C>T (p.Asp1064=) rs140899478 0.00132
NM_001291303.3(FAT4):c.12479+8G>A rs150505878 0.00121
NM_001291303.3(FAT4):c.8021A>T (p.Asp2674Val) rs138655269 0.00121
NM_001291303.3(FAT4):c.3402A>T (p.Glu1134Asp) rs144768563 0.00113
NM_001291303.3(FAT4):c.9828C>T (p.Pro3276=) rs73849226 0.00106
NM_001291303.3(FAT4):c.7052A>G (p.Asn2351Ser) rs145105421 0.00096
NM_001291303.3(FAT4):c.11619C>T (p.Cys3873=) rs141328606 0.00092
NM_001291303.3(FAT4):c.7231A>T (p.Thr2411Ser) rs147297895 0.00091
NM_001291303.3(FAT4):c.14940A>G (p.Glu4980=) rs149073729 0.00088
NM_001291303.3(FAT4):c.3682C>G (p.Gln1228Glu) rs200227715 0.00087
NM_001291303.3(FAT4):c.11670C>T (p.Cys3890=) rs150894545 0.00086
NM_001291303.3(FAT4):c.11693C>T (p.Ala3898Val) rs138275098 0.00069
NM_001291303.3(FAT4):c.7103C>A (p.Ala2368Glu) rs116568645 0.00066
NM_001291303.3(FAT4):c.11260A>G (p.Ser3754Gly) rs79909102 0.00061
NM_001291303.3(FAT4):c.5792A>G (p.Tyr1931Cys) rs139716832 0.00061
NM_001291303.3(FAT4):c.12769G>A (p.Glu4257Lys) rs143513466 0.00056
NM_001291303.3(FAT4):c.13111A>G (p.Met4371Val) rs139260545 0.00056
NM_001291303.3(FAT4):c.13555G>A (p.Ala4519Thr) rs202148971 0.00055
NM_001291303.3(FAT4):c.8290A>C (p.Asn2764His) rs147281598 0.00051
NM_001291303.3(FAT4):c.131A>C (p.Glu44Ala) rs200221425 0.00049
NM_001291303.3(FAT4):c.12342C>G (p.Ile4114Met) rs150804471 0.00048
NM_001291303.3(FAT4):c.13417G>A (p.Val4473Ile) rs145835705 0.00048
NM_001291303.3(FAT4):c.4199G>A (p.Arg1400His) rs376791829 0.00047
NM_001291303.3(FAT4):c.2917G>A (p.Val973Ile) rs199497561 0.00044
NM_001291303.3(FAT4):c.12647G>A (p.Arg4216His) rs148170326 0.00041
NM_001291303.3(FAT4):c.13460C>T (p.Ala4487Val) rs141234678 0.00040
NM_001291303.3(FAT4):c.12066C>T (p.Gly4022=) rs144476127 0.00036
NM_001291303.3(FAT4):c.5367C>T (p.Ile1789=) rs144922340 0.00035
NM_001291303.3(FAT4):c.5552C>T (p.Pro1851Leu) rs138655912 0.00035
NM_001291303.3(FAT4):c.10570C>T (p.Arg3524Trp) rs145569482 0.00034
NM_001291303.3(FAT4):c.5054G>A (p.Arg1685Gln) rs376422522 0.00034
NM_001291303.3(FAT4):c.4432A>C (p.Ile1478Leu) rs200565115 0.00033
NM_001291303.3(FAT4):c.5597C>T (p.Thr1866Met) rs141773516 0.00033
NM_001291303.3(FAT4):c.6731C>T (p.Thr2244Met) rs145342353 0.00030
NM_001291303.3(FAT4):c.11040G>A (p.Thr3680=) rs147998041 0.00026
NM_001291303.3(FAT4):c.13029T>C (p.Leu4343=) rs146822665 0.00025
NM_001291303.3(FAT4):c.5883T>C (p.Ser1961=) rs117016099 0.00025
NM_001291303.3(FAT4):c.9141C>T (p.Ser3047=) rs146492311 0.00024
NM_001291303.3(FAT4):c.7196T>C (p.Ile2399Thr) rs140285782 0.00023
NM_001291303.3(FAT4):c.829G>A (p.Ala277Thr) rs183191959 0.00021
NM_001291303.3(FAT4):c.11380C>T (p.Arg3794Trp) rs201859188 0.00020
NM_001291303.3(FAT4):c.7452T>C (p.Gly2484=) rs200513521 0.00019
NM_001291303.3(FAT4):c.6977C>T (p.Thr2326Ile) rs200344386 0.00017
NM_001291303.3(FAT4):c.2322C>T (p.Pro774=) rs200593370 0.00016
NM_001291303.3(FAT4):c.6094A>G (p.Thr2032Ala) rs147314754 0.00015
NM_001291303.3(FAT4):c.11153G>A (p.Arg3718His) rs139635339 0.00014
NM_001291303.3(FAT4):c.11822T>C (p.Val3941Ala) rs578140620 0.00014
NM_001291303.3(FAT4):c.9083A>G (p.Asp3028Gly) rs765151671 0.00014
NM_001291303.3(FAT4):c.1099G>A (p.Val367Ile) rs747531733 0.00013
NM_001291303.3(FAT4):c.4549A>C (p.Ile1517Leu) rs374899663 0.00013
NM_001291303.3(FAT4):c.13193T>C (p.Ile4398Thr) rs200729108 0.00012
NM_001291303.3(FAT4):c.8313T>C (p.Asn2771=) rs148344513 0.00012
NM_001291303.3(FAT4):c.12716T>C (p.Met4239Thr) rs137954725 0.00011
NM_001291303.3(FAT4):c.6050T>C (p.Val2017Ala) rs188126059 0.00011
NM_001291303.3(FAT4):c.9451G>A (p.Ala3151Thr) rs200702071 0.00011
NM_001291303.3(FAT4):c.12778G>A (p.Val4260Ile) rs369024765 0.00010
NM_001291303.3(FAT4):c.13088G>T (p.Gly4363Val) rs199797338 0.00010
NM_001291303.3(FAT4):c.9597T>A (p.Asp3199Glu) rs568003396 0.00010
NM_001291303.3(FAT4):c.14362G>A (p.Gly4788Arg) rs138173652 0.00009
NM_001291303.3(FAT4):c.6985C>T (p.Arg2329Cys) rs148293496 0.00009
NM_001291303.3(FAT4):c.7813A>G (p.Ile2605Val) rs745697037 0.00009
NM_001291303.3(FAT4):c.8537G>A (p.Arg2846Gln) rs373393333 0.00009
NM_001291303.3(FAT4):c.1802A>G (p.Glu601Gly) rs377156485 0.00007
NM_001291303.3(FAT4):c.12499G>A (p.Ala4167Thr) rs369432764 0.00006
NM_001291303.3(FAT4):c.2273C>T (p.Ala758Val) rs570502199 0.00006
NM_001291303.3(FAT4):c.9163C>A (p.Gln3055Lys) rs199778782 0.00005
NM_001291303.3(FAT4):c.12768C>T (p.Ser4256=) rs1006074076 0.00004
NM_001291303.3(FAT4):c.14169G>T (p.Leu4723Phe) rs760377475 0.00002
NM_001291303.3(FAT4):c.14738G>A (p.Gly4913Asp) rs765666547 0.00002
NM_001291303.3(FAT4):c.4964G>A (p.Ser1655Asn) rs572010193 0.00002
NM_001291303.3(FAT4):c.7966A>C (p.Lys2656Gln) rs760398912 0.00002
NM_001291303.3(FAT4):c.2057G>A (p.Ser686Asn) rs374104309 0.00001
NM_001291303.3(FAT4):c.2450C>T (p.Ala817Val) rs539442232 0.00001
NM_001291303.3(FAT4):c.2896A>G (p.Ile966Val) rs778631726 0.00001
NM_001291303.3(FAT4):c.5924T>C (p.Ile1975Thr) rs200276252 0.00001
NM_001291303.3(FAT4):c.842C>T (p.Thr281Ile) rs564305264 0.00001
NM_001291303.3(FAT4):c.2214C>A (p.Val738=)
NM_001291303.3(FAT4):c.2316A>G (p.Gln772=) rs187427286
NM_001291303.3(FAT4):c.2574G>A (p.Glu858=)
NM_001291303.3(FAT4):c.2705TGG[1] (p.Val903del) rs541157165
NM_001291303.3(FAT4):c.3515C>T (p.Thr1172Ile) rs535333070
NM_001291303.3(FAT4):c.739C>A (p.Pro247Thr) rs191329848
NM_001291303.3(FAT4):c.7466C>T (p.Ala2489Val) rs144853732

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