ClinVar Miner

Variants in gene PLA2G6 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
250 21 0 8 5 0 4 15

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 6 3 0 0
likely pathogenic 6 0 1 0 0
uncertain significance 3 1 0 5 2
likely benign 0 0 5 0 2
benign 0 0 2 2 0

All variants with conflicting interpretations #

Total variants: 15
Download table as spreadsheet
NM_003560.4(PLA2G6):c.1187-5A>G rs1175689296
NM_003560.4(PLA2G6):c.1427+1G>A rs750939090
NM_003560.4(PLA2G6):c.1613G>A (p.Arg538His) rs535486098
NM_003560.4(PLA2G6):c.1725G>A (p.Thr575=) rs200599704
NM_003560.4(PLA2G6):c.1799G>A (p.Arg600Gln) rs149712244
NM_003560.4(PLA2G6):c.2222G>A (p.Arg741Gln) rs121908686
NM_003560.4(PLA2G6):c.2277-6G>A rs370528124
NM_003560.4(PLA2G6):c.2340C>T (p.Asn780=) rs138683183
NM_003560.4(PLA2G6):c.2370T>G (p.Tyr790Ter) rs121908680
NM_003560.4(PLA2G6):c.238G>A (p.Ala80Thr) rs121908685
NM_003560.4(PLA2G6):c.2417C>G (p.Pro806Arg) rs140758033
NM_003560.4(PLA2G6):c.386T>C (p.Leu129Pro) rs374746113
NM_003560.4(PLA2G6):c.673C>T (p.His225Tyr) rs587784359
NM_003560.4(PLA2G6):c.898G>A (p.Ala300Thr) rs528966598
NM_003560.4(PLA2G6):c.991G>A (p.Asp331Asn) rs199935023

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