ClinVar Miner

Variants in gene PRX with conflicting interpretations

See also:
Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
755 28 3 10 8 0 2 20

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic uncertain significance likely benign benign
pathogenic 3 2 0 0
uncertain significance 2 0 7 4
likely benign 0 7 0 10
benign 0 4 10 0

All variants with conflicting interpretations #

Total variants: 20
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HGVS dbSNP
NM_020956.2(PRX):c.*1028C>A rs200033507
NM_020956.2(PRX):c.*1307C>T rs104894715
NM_020956.2(PRX):c.*1421G>A rs117336941
NM_020956.2(PRX):c.*1779T>C rs149715830
NM_020956.2(PRX):c.*2156G>A rs3814290
NM_020956.2(PRX):c.*2248C>T rs56743160
NM_020956.2(PRX):c.*2350T>A rs104894707
NM_020956.2(PRX):c.*2459G>A rs147587689
NM_020956.2(PRX):c.*2850T>C rs268671
NM_020956.2(PRX):c.*3391G>T rs139188673
NM_020956.2(PRX):c.*3413C>T rs104894708
NM_020956.2(PRX):c.*3453C>G rs3745202
NM_020956.2(PRX):c.*3578G>A rs148939995
NM_020956.2(PRX):c.*3599G>A rs268674
NM_020956.2(PRX):c.*3701C>T rs147826200
NM_020956.2(PRX):c.*4051G>A rs143289108
NM_020956.2(PRX):c.*4152C>T rs142762689
NM_020956.2(PRX):c.*936C>T rs118071705
NM_020956.2(PRX):c.133C>G (p.Arg45Gly) rs115090201
NM_020956.2(PRX):c.306C>T (p.Thr102=) rs744389

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