ClinVar Miner

Variants in gene RELN with conflicting interpretations

See also:
Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
1007 60 0 36 32 0 1 61

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic uncertain significance likely benign benign
pathogenic 0 1 0 0
uncertain significance 1 0 26 13
likely benign 0 26 0 36
benign 0 13 36 0

All variants with conflicting interpretations #

Total variants: 61
Download table as spreadsheet
HGVS dbSNP
NM_005045.3(RELN):c.-9_-1dupGGCGGCGGC rs55656324
NM_005045.4(RELN):c.-24_-22GGC[10] (p.Met1_Glu2insGlyGly) rs55656324
NM_005045.4(RELN):c.-24_-22GGC[12] (p.Met1_Glu2insGlyGlyGlyGly) rs55656324
NM_005045.4(RELN):c.-24_-22GGC[14] (p.Met1_Glu2insGlyGlyGlyGlyGlyGly) rs55656324
NM_005045.4(RELN):c.-24_-22GGC[4] rs55656324
NM_005045.4(RELN):c.-24_-22GGC[9] (p.Met1_Glu2insGly) rs55656324
NM_005045.4(RELN):c.1001G>A (p.Arg334His) rs146922726
NM_005045.4(RELN):c.1035A>G (p.Leu345=) rs113998363
NM_005045.4(RELN):c.1108G>C (p.Gly370Arg) rs143050366
NM_005045.4(RELN):c.1290-11dup rs146986040
NM_005045.4(RELN):c.1377G>A (p.Arg459=) rs73712207
NM_005045.4(RELN):c.1386C>T (p.Cys462=) rs139321058
NM_005045.4(RELN):c.1482A>T (p.Ile494=) rs764121311
NM_005045.4(RELN):c.1596G>A (p.Gln532=) rs41276154
NM_005045.4(RELN):c.1799C>T (p.Ser600Phe) rs78008536
NM_005045.4(RELN):c.2015C>T (p.Pro672Leu) rs201044262
NM_005045.4(RELN):c.2376T>C (p.Gly792=) rs398124191
NM_005045.4(RELN):c.26A>C (p.Gln9Pro) rs115165703
NM_005045.4(RELN):c.2932A>G (p.Thr978Ala) rs3025962
NM_005045.4(RELN):c.2989C>G (p.Leu997Val) rs362691
NM_005045.4(RELN):c.3123C>T (p.Gly1041=) rs41276148
NM_005045.4(RELN):c.3190G>A (p.Ala1064Thr) rs114389730
NM_005045.4(RELN):c.3411C>T (p.Gly1137=) rs137974322
NM_005045.4(RELN):c.3477C>A (p.Asn1159Lys) rs114684479
NM_005045.4(RELN):c.3651C>G (p.Ile1217Met) rs56342240
NM_005045.4(RELN):c.3712A>C (p.Asn1238His) rs114003896
NM_005045.4(RELN):c.3839G>A (p.Gly1280Glu) rs55689103
NM_005045.4(RELN):c.416C>G (p.Thr139Ser) rs79471015
NM_005045.4(RELN):c.474-7T>C rs55693709
NM_005045.4(RELN):c.5108C>G (p.Pro1703Arg) rs2229860
NM_005045.4(RELN):c.5136G>A (p.Thr1712=) rs147933593
NM_005045.4(RELN):c.5156C>T (p.Ser1719Leu) rs115913736
NM_005045.4(RELN):c.5211-25dup rs34125550
NM_005045.4(RELN):c.5351+3A>G rs6967725
NM_005045.4(RELN):c.5418C>T (p.Asp1806=) rs746613525
NM_005045.4(RELN):c.5618C>T (p.Thr1873Ile) rs41275239
NM_005045.4(RELN):c.5643G>A (p.Leu1881=) rs141387255
NM_005045.4(RELN):c.577+7G>T rs188372756
NM_005045.4(RELN):c.578-3T>C rs607755
NM_005045.4(RELN):c.5831T>G (p.Phe1944Cys) rs77664442
NM_005045.4(RELN):c.5923G>A (p.Gly1975Ser) rs114807343
NM_005045.4(RELN):c.6078C>T (p.Asn2026=) rs79610081
NM_005045.4(RELN):c.6084C>T (p.Gly2028=) rs114019779
NM_005045.4(RELN):c.6141C>T (p.Phe2047=) rs79161241
NM_005045.4(RELN):c.6343G>A (p.Gly2115Ser) rs116716038
NM_005045.4(RELN):c.6519C>T (p.Phe2173=) rs146913017
NM_005045.4(RELN):c.6671+8T>C rs362758
NM_005045.4(RELN):c.6702T>C (p.Cys2234=) rs2075043
NM_005045.4(RELN):c.6939T>C (p.Ile2313=) rs113498433
NM_005045.4(RELN):c.7086C>T (p.Thr2362=) rs362747
NM_005045.4(RELN):c.7110T>C (p.Val2370=) rs362746
NM_005045.4(RELN):c.7114G>A (p.Val2372Met) rs114344654
NM_005045.4(RELN):c.7438G>A (p.Gly2480Ser) rs150236371
NM_005045.4(RELN):c.7538C>G (p.Ser2513Cys) rs114647348
NM_005045.4(RELN):c.7644G>A (p.Ser2548=) rs150743664
NM_005045.4(RELN):c.77C>T (p.Ala26Val) rs144557847
NM_005045.4(RELN):c.7887T>C (p.Pro2629=) rs56345626
NM_005045.4(RELN):c.8005G>A (p.Val2669Ile) rs375985673
NM_005045.4(RELN):c.8046T>C (p.His2682=) rs2229864
NM_005045.4(RELN):c.8086G>A (p.Ala2696Thr) rs115640958
NM_005045.4(RELN):c.906C>T (p.Ala302=) rs114494558

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