ClinVar Miner

Variants in gene SLC34A3 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
161 20 0 10 7 0 1 18

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 4 1 0 0
likely pathogenic 4 0 0 0 0
uncertain significance 1 0 0 6 1
likely benign 0 0 6 0 6
benign 0 0 1 6 0

All variants with conflicting interpretations #

Total variants: 18
Download table as spreadsheet
NM_001177316.2(SLC34A3):c.1074G>A (p.Val358=) rs146097023
NM_001177316.2(SLC34A3):c.1140C>T (p.Leu380=) rs113568956
NM_001177316.2(SLC34A3):c.1143G>A (p.Ala381=) rs369565150
NM_001177316.2(SLC34A3):c.1149C>T (p.Ala383=) rs199536442
NM_001177316.2(SLC34A3):c.1464T>C (p.Ala488=) rs144666114
NM_001177316.2(SLC34A3):c.1484G>C (p.Gly495Ala) rs140869490
NM_001177316.2(SLC34A3):c.1561dup (p.Leu521fs) rs765816079
NM_001177316.2(SLC34A3):c.1585A>T (p.Ile529Phe) rs140639805
NM_001177316.2(SLC34A3):c.1623G>A (p.Trp541Ter) rs762610288
NM_001177316.2(SLC34A3):c.273C>T (p.Asp91=) rs145677050
NM_001177316.2(SLC34A3):c.321C>T (p.Asp107=) rs114286327
NM_001177316.2(SLC34A3):c.448+1G>A rs150841256
NM_001177316.2(SLC34A3):c.575C>T (p.Ser192Leu) rs199690076
NM_001177316.2(SLC34A3):c.756G>A (p.Gln252=) rs121918239
NM_001177316.2(SLC34A3):c.779G>A (p.Ser260Asn) rs142918575
NM_001177316.2(SLC34A3):c.790G>A (p.Gly264Ser) rs148072630
NM_001177316.2(SLC34A3):c.929G>A (p.Arg310His) rs200477567
NM_001177316.2(SLC34A3):c.978C>T (p.Ile326=) rs886044633

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