ClinVar Miner

Variants in gene TCIRG1 with conflicting interpretations

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Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
132 16 0 8 4 0 4 16

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 4 2 0 0
likely pathogenic 4 0 2 0 0
uncertain significance 2 2 0 2 2
likely benign 0 0 2 0 4
benign 0 0 2 4 0

All variants with conflicting interpretations #

Total variants: 16
Download table as spreadsheet
HGVS dbSNP
NM_006019.4(TCIRG1):c.117+1G>A rs377303800
NM_006019.4(TCIRG1):c.117+4A>T rs751881962
NM_006019.4(TCIRG1):c.1213G>C (p.Gly405Arg) rs137853150
NM_006019.4(TCIRG1):c.1297C>T (p.Gln433Ter) rs777785526
NM_006019.4(TCIRG1):c.1515C>T (p.Thr505=) rs34211419
NM_006019.4(TCIRG1):c.166C>T (p.Arg56Trp) rs36027301
NM_006019.4(TCIRG1):c.1800C>T (p.Ala600=) rs145144233
NM_006019.4(TCIRG1):c.1891del (p.Val631fs) rs1300297240
NM_006019.4(TCIRG1):c.2206C>A (p.Arg736Ser) rs587779413
NM_006019.4(TCIRG1):c.2279_2284TGGGCC[3] (p.760_761LG[3]) rs199973759
NM_006019.4(TCIRG1):c.247A>G (p.Lys83Glu) rs142855299
NM_006019.4(TCIRG1):c.303_309del (p.Glu102fs) rs886048594
NM_006019.4(TCIRG1):c.346C>T (p.Gln116Ter) rs1338631330
NM_006019.4(TCIRG1):c.384C>T (p.His128=) rs3808973
NM_006019.4(TCIRG1):c.479G>A (p.Gly160Glu) rs186758849
NM_006019.4(TCIRG1):c.482C>T (p.Pro161Leu) rs34227834

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