ClinVar Miner

Variants in gene TUBGCP6 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
574 15 0 8 11 0 1 20

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic uncertain significance likely benign benign
pathogenic 0 1 0 0
uncertain significance 1 0 10 1
likely benign 0 10 0 8
benign 0 1 8 0

All variants with conflicting interpretations #

Total variants: 20
Download table as spreadsheet
HGVS dbSNP
NM_020461.4(TUBGCP6):c.1026G>A (p.Pro342=) rs141805017
NM_020461.4(TUBGCP6):c.1118C>T (p.Pro373Leu) rs34273213
NM_020461.4(TUBGCP6):c.1452G>A (p.Pro484=) rs114942206
NM_020461.4(TUBGCP6):c.1539C>T (p.Cys513=) rs149982006
NM_020461.4(TUBGCP6):c.161C>G (p.Thr54Ser) rs139974572
NM_020461.4(TUBGCP6):c.2021C>T (p.Ala674Val) rs35446002
NM_020461.4(TUBGCP6):c.2066-6A>G rs368765755
NM_020461.4(TUBGCP6):c.245T>G (p.Leu82Arg) rs200360214
NM_020461.4(TUBGCP6):c.2487C>G (p.Val829=) rs139343360
NM_020461.4(TUBGCP6):c.2574G>C (p.Trp858Cys) rs147989796
NM_020461.4(TUBGCP6):c.2991C>T (p.Ser997=) rs143388326
NM_020461.4(TUBGCP6):c.3307C>T (p.Arg1103Trp) rs61739385
NM_020461.4(TUBGCP6):c.3383G>A (p.Arg1128Lys) rs567883079
NM_020461.4(TUBGCP6):c.3490G>A (p.Val1164Met) rs9628306
NM_020461.4(TUBGCP6):c.3538C>T (p.Pro1180Ser) rs775925434
NM_020461.4(TUBGCP6):c.3651T>C (p.His1217=) rs148914897
NM_020461.4(TUBGCP6):c.5139C>T (p.His1713=) rs149152116
NM_020461.4(TUBGCP6):c.5285C>T (p.Pro1762Leu) rs201721812
NM_020461.4(TUBGCP6):c.655G>T (p.Val219Leu) rs137934849
NM_020461.4(TUBGCP6):c.89G>A (p.Arg30Gln) rs148626062

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