ClinVar Miner

Variants in gene WDR62 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
734 113 0 47 53 0 6 94

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 0 3 4 0 0
likely pathogenic 3 0 3 0 0
uncertain significance 4 3 0 50 15
likely benign 0 0 50 0 44
benign 0 0 15 44 0

All variants with conflicting interpretations #

Total variants: 94
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_001083961.2(WDR62):c.2147-34G>A rs2301736 0.41985
NM_001083961.2(WDR62):c.700-18C>T rs10423651 0.28763
NM_001083961.2(WDR62):c.1643-39G>A rs2301735 0.07203
NM_001083961.2(WDR62):c.1768+28G>A rs77938609 0.04228
NM_001083961.2(WDR62):c.561+44C>G rs115806759 0.03880
NM_001083961.2(WDR62):c.4153+37C>G rs58041656 0.03299
NM_001083961.2(WDR62):c.3514+44G>A rs45468494 0.03042
NM_001083961.2(WDR62):c.1642+8C>T rs143309981 0.00960
NM_001083961.2(WDR62):c.2975C>T (p.Ser992Leu) rs74518295 0.00953
NM_001083961.2(WDR62):c.2991C>T (p.Ala997=) rs77898819 0.00804
NM_001083961.2(WDR62):c.142C>T (p.Leu48Phe) rs62109744 0.00795
NM_001083961.2(WDR62):c.*5G>A rs61740165 0.00745
NM_001083961.2(WDR62):c.1959-20A>G rs150830386 0.00582
NM_001083961.2(WDR62):c.866A>G (p.Lys289Arg) rs12327568 0.00494
NM_001083961.2(WDR62):c.2334-6C>A rs138928852 0.00461
NM_001083961.2(WDR62):c.3946C>G (p.Gln1316Glu) rs35811023 0.00416
NM_001083961.2(WDR62):c.1225A>G (p.Asn409Asp) rs146180912 0.00414
NM_001083961.2(WDR62):c.3812C>T (p.Ala1271Val) rs111294536 0.00310
NM_001083961.2(WDR62):c.269+19C>T rs140267028 0.00221
NM_001083961.2(WDR62):c.4312-5T>G rs182467995 0.00215
NM_001083961.2(WDR62):c.4338C>T (p.Thr1446=) rs149289227 0.00183
NM_001083961.2(WDR62):c.3786C>T (p.Gly1262=) rs148415080 0.00176
NM_001083961.2(WDR62):c.2016C>T (p.Asp672=) rs114968951 0.00170
NM_001083961.2(WDR62):c.253G>A (p.Val85Met) rs146274964 0.00161
NM_001083961.2(WDR62):c.3033G>A (p.Pro1011=) rs118175551 0.00148
NM_001083961.2(WDR62):c.1359C>T (p.Asn453=) rs148667984 0.00138
NM_001083961.2(WDR62):c.2666T>C (p.Met889Thr) rs139749569 0.00137
NM_001083961.2(WDR62):c.3440A>G (p.Tyr1147Cys) rs146867414 0.00113
NM_001083961.2(WDR62):c.2211-4G>A rs202109439 0.00096
NM_001083961.2(WDR62):c.2381C>G (p.Pro794Arg) rs149431376 0.00084
NM_001083961.2(WDR62):c.3303G>A (p.Thr1101=) rs117887683 0.00078
NM_001083961.2(WDR62):c.1228G>T (p.Val410Leu) rs139460397 0.00077
NM_001083961.2(WDR62):c.3763G>A (p.Val1255Ile) rs146180208 0.00075
NM_001083961.2(WDR62):c.2529C>T (p.Asp843=) rs144697999 0.00073
NM_001083961.2(WDR62):c.303C>A (p.Asn101Lys) rs139371621 0.00073
NM_001083961.2(WDR62):c.1769-7C>T rs137919897 0.00071
NM_001083961.2(WDR62):c.922A>G (p.Ile308Val) rs146229976 0.00070
NM_001083961.2(WDR62):c.3612C>T (p.Gly1204=) rs139946168 0.00066
NM_001083961.2(WDR62):c.4564G>A (p.Gly1522Arg) rs142600079 0.00053
NM_001083961.2(WDR62):c.477G>A (p.Ala159=) rs146485488 0.00051
NM_001083961.2(WDR62):c.744C>T (p.Gly248=) rs146898747 0.00045
NM_001083961.2(WDR62):c.4159C>A (p.Leu1387Ile) rs147652186 0.00041
NM_001083961.2(WDR62):c.3058G>A (p.Ala1020Thr) rs144120866 0.00040
NM_001083961.2(WDR62):c.82C>T (p.Arg28Trp) rs200283315 0.00038
NM_001083961.2(WDR62):c.2976G>A (p.Ser992=) rs757294519 0.00035
NM_001083961.2(WDR62):c.203T>C (p.Ile68Thr) rs148615988 0.00031
NM_001083961.2(WDR62):c.2211-8C>T rs369077520 0.00031
NM_001083961.2(WDR62):c.546C>T (p.Asn182=) rs199931318 0.00026
NM_001083961.2(WDR62):c.1576G>A (p.Glu526Lys) rs147875659 0.00022
NM_001083961.2(WDR62):c.820T>G (p.Tyr274Asp) rs746156911 0.00021
NM_001083961.2(WDR62):c.1233+7C>G rs537771936 0.00017
NM_001083961.2(WDR62):c.189G>T (p.Glu63Asp) rs201053854 0.00016
NM_001083961.2(WDR62):c.3087C>T (p.Cys1029=) rs141344823 0.00015
NM_001083961.2(WDR62):c.824C>T (p.Ser275Leu) rs202014178 0.00014
NM_001083961.2(WDR62):c.121T>A (p.Cys41Ser) rs761479779 0.00013
NM_001083961.2(WDR62):c.2766C>T (p.Arg922=) rs373906889 0.00013
NM_001083961.2(WDR62):c.391-10C>T rs201568145 0.00013
NM_001083961.2(WDR62):c.1043+3A>G rs587784541 0.00009
NM_001083961.2(WDR62):c.4122C>T (p.Gly1374=) rs773948810 0.00008
NM_001083961.2(WDR62):c.1480G>A (p.Gly494Arg) rs587784543 0.00006
NM_001083961.2(WDR62):c.1509C>T (p.Asp503=) rs758922011 0.00005
NM_001083961.2(WDR62):c.3558C>T (p.Ser1186=) rs111889921 0.00005
NM_001083961.2(WDR62):c.1977C>T (p.Asn659=) rs79238222 0.00004
NM_001083961.2(WDR62):c.3733C>A (p.Leu1245Met) rs763947043 0.00004
NM_001083961.2(WDR62):c.4144C>T (p.Pro1382Ser) rs772768990 0.00004
NM_001083961.2(WDR62):c.4329G>A (p.Gln1443=) rs771131709 0.00004
NM_001083961.2(WDR62):c.1479C>T (p.Ala493=) rs150656878 0.00002
NM_001083961.2(WDR62):c.1521G>A (p.Leu507=) rs778207666 0.00002
NM_001083961.2(WDR62):c.3514+1G>A rs199736219 0.00002
NM_001083961.2(WDR62):c.1434C>G (p.Phe478Leu) rs542178534 0.00001
NM_001083961.2(WDR62):c.1531G>A (p.Asp511Asn) rs387907083 0.00001
NM_001083961.2(WDR62):c.1642+9G>A rs112789274 0.00001
NM_001083961.2(WDR62):c.2040T>C (p.His680=) rs765451882 0.00001
NM_001083961.2(WDR62):c.3463-9T>C rs1346976662 0.00001
NM_001083961.2(WDR62):c.4033C>T (p.Arg1345Cys) rs201363122 0.00001
NM_001083961.2(WDR62):c.525C>T (p.Tyr175=) rs779093591 0.00001
NM_001083961.2(WDR62):c.699+16T>C rs201300686 0.00001
NM_001083961.2(WDR62):c.1233+11C>A rs116050630
NM_001083961.2(WDR62):c.1233+15del rs373693641
NM_001083961.2(WDR62):c.1233+15dup rs373693641
NM_001083961.2(WDR62):c.156C>G (p.Ser52=) rs398123559
NM_001083961.2(WDR62):c.1641G>T (p.Thr547=) rs2301734
NM_001083961.2(WDR62):c.1768+17C>T
NM_001083961.2(WDR62):c.1959-10A>C rs767989054
NM_001083961.2(WDR62):c.1987AAG[1] (p.Lys664del) rs764610550
NM_001083961.2(WDR62):c.2112G>C (p.Ser704=) rs115453534
NM_001083961.2(WDR62):c.2334-29C>T rs2301737
NM_001083961.2(WDR62):c.2396_2397del (p.Glu799fs) rs747870811
NM_001083961.2(WDR62):c.2588G>A (p.Arg863His)
NM_001083961.2(WDR62):c.269+12del rs797046108
NM_001083961.2(WDR62):c.2739+17C>A rs144527765
NM_001083961.2(WDR62):c.3162G>A (p.Pro1054=) rs200232641
NM_001083961.2(WDR62):c.3271_3273del (p.His1091del) rs794727435
NM_001083961.2(WDR62):c.3641C>T (p.Thr1214Ile) rs752898108

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