ClinVar Miner

Variants in gene ZEB2 with conflicting interpretations

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Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic) 		Variants with a confidence conflict
(e.g. benign vs likely benign) 		Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects) 		Variants with a clinically significant conflict
(e.g. benign vs pathogenic) 		Variants with any conflict
1149 73 0 54 46 1 3 97

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign protective other
pathogenic 0 7 1 1 1 1 1
likely pathogenic 6 0 2 0 0 0 0
uncertain significance 0 2 0 33 16 0 0
likely benign 0 0 33 0 47 0 0
benign 0 0 16 47 0 0 0

All variants with conflicting interpretations #

Total variants: 97
Download table as spreadsheet
HGVS dbSNP gnomAD frequency
NM_014795.4(ZEB2):c.917-21T>C rs35213774 0.10114
NM_014795.4(ZEB2):c.930C>T (p.Tyr310=) rs6711223 0.01102
NM_014795.4(ZEB2):c.403+18C>T rs116404871 0.00305
NM_014795.4(ZEB2):c.2141C>T (p.Pro714Leu) rs112581563 0.00281
NM_014795.4(ZEB2):c.489C>T (p.Ile163=) rs138859323 0.00277
NM_014795.4(ZEB2):c.1480C>T (p.Pro494Ser) rs144952836 0.00206
NM_014795.4(ZEB2):c.807+3G>C rs144925893 0.00194
NM_014795.4(ZEB2):c.2230A>G (p.Ile744Val) rs112005830 0.00087
NM_014795.4(ZEB2):c.1161A>G (p.Leu387=) rs146673563 0.00084
NM_014795.4(ZEB2):c.798G>C (p.Gly266=) rs34961586 0.00078
NM_014795.4(ZEB2):c.2206A>G (p.Met736Val) rs139191491 0.00067
NM_014795.4(ZEB2):c.2205T>C (p.Pro735=) rs149964599 0.00062
NM_014795.4(ZEB2):c.1306A>G (p.Met436Val) rs145812868 0.00052
NM_014795.4(ZEB2):c.1276T>A (p.Leu426Ile) rs201881288 0.00036
NM_014795.4(ZEB2):c.759C>T (p.Arg253=) rs150853991 0.00033
NM_014795.4(ZEB2):c.2601G>A (p.Lys867=) rs139369265 0.00029
NM_014795.4(ZEB2):c.1438G>T (p.Ala480Ser) rs143854197 0.00026
NM_014795.4(ZEB2):c.1735A>G (p.Thr579Ala) rs140593583 0.00026
NM_014795.4(ZEB2):c.2142G>A (p.Pro714=) rs201180901 0.00025
NM_014795.4(ZEB2):c.462G>A (p.Glu154=) rs372940559 0.00023
NM_014795.4(ZEB2):c.304A>T (p.Ile102Phe) rs201109457 0.00022
NM_014795.4(ZEB2):c.10C>G (p.Pro4Ala) rs146394306 0.00015
NM_014795.4(ZEB2):c.1848T>G (p.Pro616=) rs144835963 0.00014
NM_014795.4(ZEB2):c.2457A>G (p.Ser819=) rs144184948 0.00014
NM_014795.4(ZEB2):c.2973C>T (p.Ile991=) rs572507342 0.00014
NM_014795.4(ZEB2):c.3640A>G (p.Met1214Val) rs199951665 0.00014
NM_014795.4(ZEB2):c.2084G>A (p.Arg695Gln) rs147693839 0.00012
NM_014795.4(ZEB2):c.1840C>T (p.Leu614=) rs145201706 0.00011
NM_014795.4(ZEB2):c.3219C>T (p.His1073=) rs139944383 0.00009
NM_014795.4(ZEB2):c.1221C>T (p.His407=) rs144613207 0.00006
NM_014795.4(ZEB2):c.2275A>G (p.Arg759Gly) rs748354087 0.00006
NM_014795.4(ZEB2):c.2361T>C (p.Asn787=) rs201567433 0.00006
NM_014795.4(ZEB2):c.2855G>C (p.Arg952Thr) rs151256895 0.00006
NM_014795.4(ZEB2):c.1876G>A (p.Gly626Arg) rs727504224 0.00005
NM_014795.4(ZEB2):c.219C>T (p.His73=) rs778851716 0.00005
NM_014795.4(ZEB2):c.295A>G (p.Asn99Asp) rs150665982 0.00005
NM_014795.4(ZEB2):c.332-6C>T rs730881186 0.00004
NM_014795.4(ZEB2):c.374C>T (p.Thr125Met) rs727504227 0.00004
NM_014795.4(ZEB2):c.395A>G (p.Asn132Ser) rs369622877 0.00004
NM_014795.4(ZEB2):c.466C>T (p.Arg156Cys) rs147021269 0.00004
NM_014795.4(ZEB2):c.768C>T (p.Leu256=) rs370751674 0.00004
NM_014795.4(ZEB2):c.1533C>T (p.Val511=) rs587780994 0.00003
NM_014795.4(ZEB2):c.167T>C (p.Leu56Pro) rs61750440 0.00003
NM_014795.4(ZEB2):c.1836G>A (p.Ala612=) rs754916469 0.00003
NM_014795.4(ZEB2):c.2255C>T (p.Thr752Met) rs143438888 0.00003
NM_014795.4(ZEB2):c.2300C>T (p.Thr767Ile) rs755233964 0.00003
NM_014795.4(ZEB2):c.2541C>T (p.Asn847=) rs759097498 0.00003
NM_014795.4(ZEB2):c.2886+4A>C rs754532627 0.00003
NM_014795.4(ZEB2):c.220G>A (p.Val74Met) rs767169568 0.00002
NM_014795.4(ZEB2):c.2215A>G (p.Ile739Val) rs730881178 0.00002
NM_014795.4(ZEB2):c.2352T>C (p.Ser784=) rs201990887 0.00002
NM_014795.4(ZEB2):c.2766A>T (p.Pro922=) rs185223937 0.00002
NM_014795.4(ZEB2):c.309A>G (p.Leu103=) rs187331667 0.00002
NM_014795.4(ZEB2):c.1112A>T (p.Asn371Ile) rs1290033369 0.00001
NM_014795.4(ZEB2):c.1288C>T (p.Pro430Ser) rs753804606 0.00001
NM_014795.4(ZEB2):c.150C>T (p.Asp50=) rs587780996 0.00001
NM_014795.4(ZEB2):c.179C>T (p.Thr60Met) rs780890592 0.00001
NM_014795.4(ZEB2):c.2004G>T (p.Glu668Asp) rs767506087 0.00001
NM_014795.4(ZEB2):c.2365T>C (p.Ser789Pro) rs730881197 0.00001
NM_014795.4(ZEB2):c.2390A>G (p.His797Arg) rs201227541 0.00001
NM_014795.4(ZEB2):c.2497A>G (p.Thr833Ala) rs1490526407 0.00001
NM_014795.4(ZEB2):c.26G>A (p.Gly9Asp) rs1242134764 0.00001
NM_014795.4(ZEB2):c.385G>A (p.Ala129Thr) rs730881187 0.00001
NM_014795.4(ZEB2):c.388A>G (p.Ile130Val) rs1057520175 0.00001
NM_014795.4(ZEB2):c.773G>A (p.Arg258Gln) rs730881173 0.00001
NM_014795.4(ZEB2):c.1446A>C (p.Glu482Asp) rs886043609
NM_014795.4(ZEB2):c.1534G>A (p.Gly512Ser) rs141781307
NM_014795.4(ZEB2):c.1542G>A (p.Pro514=) rs141674976
NM_014795.4(ZEB2):c.1542G>T (p.Pro514=) rs141674976
NM_014795.4(ZEB2):c.1875C>T (p.Ala625=) rs752759296
NM_014795.4(ZEB2):c.1884del (p.Phe628fs) rs786204811
NM_014795.4(ZEB2):c.1993A>G (p.Met665Val) rs1388932284
NM_014795.4(ZEB2):c.2226A>T (p.Pro742=) rs540345773
NM_014795.4(ZEB2):c.2255C>G (p.Thr752Arg) rs143438888
NM_014795.4(ZEB2):c.2471T>C (p.Met824Thr) rs1553961536
NM_014795.4(ZEB2):c.2486G>A (p.Ser829Asn) rs730881198
NM_014795.4(ZEB2):c.2495C>A (p.Ala832Asp) rs730881179
NM_014795.4(ZEB2):c.2627A>G (p.Asp876Gly) rs779103467
NM_014795.4(ZEB2):c.2707G>T (p.Ala903Ser) rs730881200
NM_014795.4(ZEB2):c.2752C>T (p.Pro918Ser) rs1560605894
NM_014795.4(ZEB2):c.3046C>T (p.Arg1016Ter) rs886041989
NM_014795.4(ZEB2):c.3047G>A (p.Arg1016Gln) rs2149875484
NM_014795.4(ZEB2):c.3067+6A>T rs143450927
NM_014795.4(ZEB2):c.3095del (p.Cys1032fs) rs1060500653
NM_014795.4(ZEB2):c.3535A>G (p.Ile1179Val) rs1360979536
NM_014795.4(ZEB2):c.593-18_593-17insTG rs776927209
NM_014795.4(ZEB2):c.702C>T (p.His234=) rs140169964
NM_014795.4(ZEB2):c.73+2T>C rs398124282
NM_014795.4(ZEB2):c.74-3C>T rs984545941
NM_014795.4(ZEB2):c.797G>A (p.Gly266Glu) rs1057522361
NM_014795.4(ZEB2):c.807+3G>T rs144925893
NM_014795.4(ZEB2):c.82_87del (p.Tyr28_Asp29del) rs730881214
NM_014795.4(ZEB2):c.876dup (p.Tyr293fs) rs2149877962
NM_014795.4(ZEB2):c.917G>A (p.Gly306Asp) rs1703292916
NM_014795.4(ZEB2):c.980C>A (p.Ser327Ter) rs756686919
NM_014795.4(ZEB2):c.9G>A (p.Gln3=) rs149882004
Single allele

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