ClinVar Miner

Variants from MVZ Dr. Eberhard & Partner Dortmund with conflicting interpretations

Location: Germany  Primary collection method: clinical testing
Minimum review status of the submission from MVZ Dr. Eberhard & Partner Dortmund: Collection method of the submission from MVZ Dr. Eberhard & Partner Dortmund:
Minimum review status of the other submission: Collection method of the other submission:
Minimum conflict level:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
103 4 0 3 2 0 3 8

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

All submitters
MVZ Dr. Eberhard & Partner Dortmund pathogenic likely pathogenic uncertain significance
pathogenic 0 1 0
likely pathogenic 2 0 0
uncertain significance 0 3 0
likely benign 0 0 2

Submitter to submitter summary #

Total submitters: 5
Download table as spreadsheet
Submitter Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
Invitae 0 4 0 2 1 0 2 5
Genetic Services Laboratory, University of Chicago 0 0 0 0 2 0 0 2
Revvity Omics, Revvity 0 0 0 1 0 0 1 2
ARUP Laboratories, Molecular Genetics and Genomics, ARUP Laboratories 0 0 0 1 0 0 0 1
PreventionGenetics, part of Exact Sciences 0 1 0 1 0 0 0 1

All variants with conflicting interpretations #

Total variants: 8
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HGVS dbSNP gnomAD frequency
NM_000352.6(ABCC8):c.291-3C>T rs764107333 0.00002
NM_001807.6(CEL):c.400G>A (p.Gly134Ser) rs377284693 0.00002
NM_000342.4(SLC4A1):c.349+1G>A rs1567834739
NM_000352.6(ABCC8):c.916C>T (p.Arg306Cys)
NM_000478.6(ALPL):c.1143C>G (p.His381Gln) rs749419329
NM_001355436.2(SPTB):c.154C>T (p.Arg52Trp) rs1594796374
NM_001355436.2(SPTB):c.208C>T (p.Arg70Ter) rs1566775577
NM_130849.4(SLC39A4):c.947_948dup (p.Val317fs)

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