ClinVar Miner

Variants in gene LAMC3 with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission per condition Variants with at least 2 submissions on the same condition and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any conflict
187 12 0 36 19 0 0 51

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

uncertain significance likely benign benign
uncertain significance 0 19 4
likely benign 19 0 36
benign 4 36 0

All variants with conflicting interpretations #

Total variants: 51
Download table as spreadsheet
NM_006059.4(LAMC3):c.-2C>T rs137883250
NM_006059.4(LAMC3):c.1019G>A (p.Arg340Gln) rs149004188
NM_006059.4(LAMC3):c.146A>G (p.Gln49Arg) rs201962705
NM_006059.4(LAMC3):c.1520-6G>A rs192031352
NM_006059.4(LAMC3):c.1564C>T (p.Pro522Ser) rs869457
NM_006059.4(LAMC3):c.1630+5C>G rs184221540
NM_006059.4(LAMC3):c.1792G>A (p.Gly598Arg) rs116422150
NM_006059.4(LAMC3):c.1884C>T (p.Leu628=) rs762552193
NM_006059.4(LAMC3):c.1939G>C (p.Gly647Arg) rs144242690
NM_006059.4(LAMC3):c.2039C>T (p.Thr680Met) rs73658916
NM_006059.4(LAMC3):c.2066C>T (p.Pro689Leu) rs113443891
NM_006059.4(LAMC3):c.219T>G (p.His73Gln) rs3739512
NM_006059.4(LAMC3):c.2227A>G (p.Asn743Asp) rs36030184
NM_006059.4(LAMC3):c.2352G>A (p.Arg784=) rs35654564
NM_006059.4(LAMC3):c.2438G>A (p.Ser813Asn) rs55741126
NM_006059.4(LAMC3):c.2439C>G (p.Ser813Arg) rs61637370
NM_006059.4(LAMC3):c.2516C>T (p.Thr839Met) rs57816762
NM_006059.4(LAMC3):c.2517G>A (p.Thr839=) rs140540789
NM_006059.4(LAMC3):c.2559C>T (p.Ser853=) rs34652877
NM_006059.4(LAMC3):c.2891-8C>T rs199535979
NM_006059.4(LAMC3):c.2987G>A (p.Arg996His) rs113785045
NM_006059.4(LAMC3):c.3108G>A (p.Gly1036=) rs10901344
NM_006059.4(LAMC3):c.3114C>G (p.Leu1038=) rs10901345
NM_006059.4(LAMC3):c.3250G>C (p.Glu1084Gln) rs146221263
NM_006059.4(LAMC3):c.3347C>G (p.Ala1116Gly) rs36028197
NM_006059.4(LAMC3):c.3371C>T (p.Ser1124Phe) rs113259170
NM_006059.4(LAMC3):c.3379G>A (p.Glu1127Lys) rs140955110
NM_006059.4(LAMC3):c.3624G>A (p.Glu1208=) rs569440839
NM_006059.4(LAMC3):c.368G>T (p.Arg123Leu) rs140461419
NM_006059.4(LAMC3):c.3790C>T (p.Arg1264Trp) rs11244275
NM_006059.4(LAMC3):c.3927+8C>G rs148008251
NM_006059.4(LAMC3):c.4068G>A (p.Ala1356=) rs377618961
NM_006059.4(LAMC3):c.4092C>T (p.Ser1364=) rs141724499
NM_006059.4(LAMC3):c.4130C>T (p.Thr1377Ile) rs144662546
NM_006059.4(LAMC3):c.4146G>A (p.Arg1382=) rs147092908
NM_006059.4(LAMC3):c.4146G>C (p.Arg1382Ser) rs147092908
NM_006059.4(LAMC3):c.4160C>T (p.Ala1387Val) rs141497885
NM_006059.4(LAMC3):c.4231-10C>T rs4740411
NM_006059.4(LAMC3):c.42_50dup (p.Pro15_Ala17dup) rs1057520165
NM_006059.4(LAMC3):c.4348C>T (p.Arg1450Cys) rs201785610
NM_006059.4(LAMC3):c.4376G>A (p.Arg1459Gln) rs4740412
NM_006059.4(LAMC3):c.4477+9G>T rs201360815
NM_006059.4(LAMC3):c.454C>T (p.Arg152Cys) rs45628035
NM_006059.4(LAMC3):c.4561T>G (p.Ser1521Ala) rs117361076
NM_006059.4(LAMC3):c.517C>T (p.Arg173Trp) rs145775274
NM_006059.4(LAMC3):c.521_522delinsAG (p.Pro174Gln) rs386738954
NM_006059.4(LAMC3):c.558C>T (p.Arg186=) rs2275135
NM_006059.4(LAMC3):c.75C>T (p.Cys25=) rs13286358
NM_006059.4(LAMC3):c.786G>A (p.Val262=) rs2275133
NM_006059.4(LAMC3):c.92G>T (p.Arg31Leu) rs116259120
NM_006059.4(LAMC3):c.944G>A (p.Arg315Gln) rs45444592

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