ClinVar Miner

Variants in gene LMNA with conflicting interpretations

Y axis minimum submission review status: Y axis collection method:
X axis minimum submission review status: X axis collection method:
Minimum conflict level:
Gene type:
ClinVar version:

If a variant has more than two submissions, it may have multiple conflicts and therefore be counted in more than one conflict column. If this is the case, the "Variants with any kind of conflict" cell will be less than the sum of the conflicted variants cells to its left.

Variants with only 1 submission Variants with at least 2 submissions and no conflicts Variants with a synonymous conflict
(e.g. benign vs non-pathogenic)
Variants with a confidence conflict
(e.g. benign vs likely benign)
Variants with a benign or likely benign vs uncertain conflict Variants with a category conflict
(e.g. benign vs affects)
Variants with a clinically significant conflict
(e.g. benign vs pathogenic)
Variants with any kind of conflict
491 202 9 60 37 0 36 128

Significance breakdown #

In the table below, cells that correspond to a term paired with itself represent synonymous conflicts, i.e. variants that have been annotated with different terms that map to the same standard term. To compare the terms that were actually submitted, check the box in the filters section at the top of this page.

pathogenic likely pathogenic uncertain significance likely benign benign
pathogenic 9 35 15 0 0
likely pathogenic 35 0 23 1 0
uncertain significance 15 23 0 35 12
likely benign 0 1 35 0 25
benign 0 0 12 25 0

All variants with conflicting interpretations #

Total variants: 128
Download table as spreadsheet
HGVS dbSNP
NM_001282624.1(LMNA):c.342C>G (p.Asn114Lys) rs28933091
NM_001282625.1(LMNA):c.448A>G (p.Thr150Ala) rs58917027
NM_005572.3(LMNA):c.1003C>T (p.Arg335Trp) rs386134243
NM_005572.3(LMNA):c.1017G>A (p.Ala339=) rs17847242
NM_005572.3(LMNA):c.111G>A (p.Glu37=) rs886038906
NM_005572.3(LMNA):c.1201C>T (p.Arg401Cys) rs61094188
NM_005572.3(LMNA):c.1338T>C (p.Asp446=) rs505058
NM_005572.3(LMNA):c.1376A>G (p.Asn459Ser) rs372011095
NM_005572.3(LMNA):c.1445G>T (p.Arg482Leu) rs11575937
NM_005572.3(LMNA):c.1488G>A (p.Thr496=) rs375516745
NM_005572.3(LMNA):c.1526dupC (p.Thr510Tyrfs) rs58013325
NM_005572.3(LMNA):c.1584G>A (p.Thr528=) rs80356812
NM_005572.3(LMNA):c.1622G>C (p.Arg541Pro) rs61444459
NM_005572.3(LMNA):c.1698C>T (p.His566=) rs4641
NM_005572.3(LMNA):c.1711C>A (p.Arg571Ser) rs80338938
NM_005572.3(LMNA):c.1712G>A (p.Arg571His) rs200917748
NM_005572.3(LMNA):c.294G>A (p.Glu98=) rs886045363
NM_005572.3(LMNA):c.356+1G>C rs794728589
NM_005572.3(LMNA):c.438C>T (p.Ala146=) rs80356805
NM_005572.3(LMNA):c.51C>T (p.Ser17=) rs11549668
NM_005572.3(LMNA):c.664C>T (p.His222Tyr) rs28928901
NM_005572.3(LMNA):c.673C>T (p.Arg225Ter) rs60682848
NM_005572.3(LMNA):c.674G>A (p.Arg225Gln) rs199474724
NM_005572.3(LMNA):c.861T>C (p.Ala287=) rs538089
NM_005572.3(LMNA):c.936+12C>T rs199881992
NM_005572.3(LMNA):c.959delT (p.Arg321Glufs) rs56771886
NM_170707.2(LMNA):c.1185G>A (p.Ser395=) rs397517890
NM_170707.2(LMNA):c.127G>A (p.Ala43Thr) rs60446065
NM_170707.2(LMNA):c.1609-1G>A rs111569862
NM_170707.2(LMNA):c.356G>C (p.Arg119Pro) rs397517902
NM_170707.2(LMNA):c.3G>C (p.Met1Ile) rs794728598
NM_170707.2(LMNA):c.3G>T (p.Met1Ile) rs794728598
NM_170707.2(LMNA):c.513+2T>G rs1553264668
NM_170707.2(LMNA):c.640-10A>G rs80356807
NM_170707.2(LMNA):c.694G>A (p.Gly232Arg) rs267607609
NM_170707.2(LMNA):c.736C>T (p.Gln246Ter) rs267607587
NM_170707.2(LMNA):c.73C>G (p.Arg25Gly) rs58327533
NM_170707.2(LMNA):c.777T>A (p.Tyr259Ter) rs58048078
NM_170707.2(LMNA):c.781_783delAAG (p.Lys261del) rs58978449
NM_170707.2(LMNA):c.799T>C (p.Tyr267His) rs267607593
NM_170707.2(LMNA):c.992G>A (p.Arg331Gln) rs59301204
NM_170707.3(LMNA):c.1003delC (p.Arg335Glyfs) rs1553265660
NM_170707.3(LMNA):c.1045C>T (p.Arg349Trp) rs267607555
NM_170707.3(LMNA):c.1051A>C (p.Arg351=) rs771623461
NM_170707.3(LMNA):c.1098G>A (p.Lys366=) rs57901307
NM_170707.3(LMNA):c.1106T>C (p.Leu369Pro) rs397517886
NM_170707.3(LMNA):c.1112_1115dup (p.Glu372Aspfs) rs397517888
NM_170707.3(LMNA):c.1122C>T (p.His374=) rs143715750
NM_170707.3(LMNA):c.1129C>T (p.Arg377Cys) rs397517889
NM_170707.3(LMNA):c.1146C>T (p.Gly382=) rs57508089
NM_170707.3(LMNA):c.1149G>A (p.Glu383=) rs267607603
NM_170707.3(LMNA):c.1157+16G>A rs534807
NM_170707.3(LMNA):c.1160T>C (p.Leu387Pro) rs879253934
NM_170707.3(LMNA):c.1195C>T (p.Arg399Cys) rs58672172
NM_170707.3(LMNA):c.122G>T (p.Arg41Leu) rs1060502215
NM_170707.3(LMNA):c.1294C>T (p.Gln432Ter) rs267607618
NM_170707.3(LMNA):c.1299C>T (p.His433=) rs61217436
NM_170707.3(LMNA):c.12G>A (p.Pro4=) rs369823958
NM_170707.3(LMNA):c.1303C>T (p.Arg435Cys) rs150840924
NM_170707.3(LMNA):c.1311C>T (p.Ser437=) rs763224059
NM_170707.3(LMNA):c.1314G>A (p.Gly438=) rs774817302
NM_170707.3(LMNA):c.1318G>A (p.Val440Met) rs121912493
NM_170707.3(LMNA):c.134A>G (p.Tyr45Cys) rs58436778
NM_170707.3(LMNA):c.1357C>T (p.Arg453Trp) rs58932704
NM_170707.3(LMNA):c.1381-6C>T rs371635492
NM_170707.3(LMNA):c.1411C>T (p.Arg471Cys) rs28928902
NM_170707.3(LMNA):c.1412G>A (p.Arg471His) rs267607578
NM_170707.3(LMNA):c.1436delT (p.Leu479Argfs) rs1553266024
NM_170707.3(LMNA):c.1488+8G>A rs762836610
NM_170707.3(LMNA):c.1551G>A (p.Gln517=) rs41314035
NM_170707.3(LMNA):c.1566C>T (p.Cys522=) rs149339264
NM_170707.3(LMNA):c.1567G>A (p.Gly523Arg) rs201583907
NM_170707.3(LMNA):c.1580G>A (p.Arg527His) rs57520892
NM_170707.3(LMNA):c.1583C>A (p.Thr528Lys) rs57629361
NM_170707.3(LMNA):c.1583C>G (p.Thr528Arg) rs57629361
NM_170707.3(LMNA):c.1588C>T (p.Leu530Phe) rs780302064
NM_170707.3(LMNA):c.1609-3C>G rs267607581
NM_170707.3(LMNA):c.1621C>T (p.Arg541Cys) rs56984562
NM_170707.3(LMNA):c.1622G>A (p.Arg541His) rs61444459
NM_170707.3(LMNA):c.1633C>T (p.Arg545Cys) rs267607613
NM_170707.3(LMNA):c.1634G>A (p.Arg545His) rs142191737
NM_170707.3(LMNA):c.1656C>T (p.Asp552=) rs370219874
NM_170707.3(LMNA):c.16C>T (p.Gln6Ter) rs61046466
NM_170707.3(LMNA):c.1718C>T (p.Ser573Leu) rs60890628
NM_170707.3(LMNA):c.1749G>A (p.Ser583=) rs970494454
NM_170707.3(LMNA):c.1761G>A (p.Leu587=) rs80356813
NM_170707.3(LMNA):c.1773C>T (p.Cys591=) rs397517897
NM_170707.3(LMNA):c.1786G>A (p.Asp596Asn) rs769561386
NM_170707.3(LMNA):c.1804G>A (p.Gly602Ser) rs60662302
NM_170707.3(LMNA):c.1911C>T (p.Phe637=) rs117939448
NM_170707.3(LMNA):c.1912G>A (p.Gly638Arg) rs144851946
NM_170707.3(LMNA):c.192C>T (p.Thr64=) rs137969290
NM_170707.3(LMNA):c.1930C>T (p.Arg644Cys) rs142000963
NM_170707.3(LMNA):c.1931G>A (p.Arg644His) rs368386019
NM_170707.3(LMNA):c.29C>T (p.Thr10Ile) rs57077886
NM_170707.3(LMNA):c.344A>T (p.Glu115Val) rs794728588
NM_170707.3(LMNA):c.350A>G (p.Lys117Arg) rs397517901
NM_170707.3(LMNA):c.357C>T (p.Arg119=) rs41313880
NM_170707.3(LMNA):c.398G>A (p.Arg133Gln) rs60864230
NM_170707.3(LMNA):c.398G>C (p.Arg133Pro) rs60864230
NM_170707.3(LMNA):c.471G>A (p.Thr157=) rs150645079
NM_170707.3(LMNA):c.481G>A (p.Glu161Lys) rs28933093
NM_170707.3(LMNA):c.497G>C (p.Arg166Pro) rs267607570
NM_170707.3(LMNA):c.569G>A (p.Arg190Gln) rs267607571
NM_170707.3(LMNA):c.607G>A (p.Glu203Lys) rs61195471
NM_170707.3(LMNA):c.612G>A (p.Leu204=) rs12117552
NM_170707.3(LMNA):c.618C>G (p.Phe206Leu) rs267607629
NM_170707.3(LMNA):c.643C>T (p.Leu215=) rs397517905
NM_170707.3(LMNA):c.646C>T (p.Arg216Cys) rs794728591
NM_170707.3(LMNA):c.700C>T (p.Gln234Ter) rs267607573
NM_170707.3(LMNA):c.749C>T (p.Ala250Val) rs397517907
NM_170707.3(LMNA):c.789G>A (p.Leu263=) rs148557956
NM_170707.3(LMNA):c.78C>T (p.Ile26=) rs373721390
NM_170707.3(LMNA):c.811-13T>A rs80356809
NM_170707.3(LMNA):c.859delG (p.Ala287Leufs) rs59564495
NM_170707.3(LMNA):c.868G>A (p.Glu290Lys) rs397517912
NM_170707.3(LMNA):c.870G>A (p.Glu290=) rs747275587
NM_170707.3(LMNA):c.892C>T (p.Arg298Cys) rs59885338
NM_170707.3(LMNA):c.895A>G (p.Ile299Val) rs150924946
NM_170707.3(LMNA):c.937-7C>G rs267607681
NM_170707.3(LMNA):c.937-8C>A rs751707982
NM_170707.3(LMNA):c.948G>A (p.Lys316=) rs778421025
NM_170707.3(LMNA):c.949G>A (p.Glu317Lys) rs56816490
NM_170707.3(LMNA):c.976T>A (p.Ser326Thr) rs56851164
NM_170707.4(LMNA):c.1851C>T (p.Ala617=) rs143189394
NM_170707.4(LMNA):c.250G>A (p.Glu84Lys) rs794728602
NM_170707.4(LMNA):c.726G>A (p.Ala242=) rs763625309
NM_170707.4(LMNA):c.732G>A (p.Ala244=) rs756952925

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